RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SH3BGRL3Q9H299 93 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 GSX1Q9H4S2 264 aaPredicted RBP5.21□□□□□ -1.58
ATG4A-207ENST00000474825 FNDC4Q9H6D8 234 aaPredicted RBP5.21□□□□□ -1.58
ATG4A-207ENST00000474825 PARP11Q9NR21 331 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 FBXO7Q9Y3I1 522 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 CSPG4Q6UVK1 2322 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 IGKV1OR2-108A0A075B7D4 117 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 TRBV9A0A0B4J1U6 114 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 H3BUX3 64 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 CNIH1O95406 144 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 FCGR2BP31994 310 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-207ENST00000474825 OPRK1P41145 380 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 RPL29P47914 159 aaKnown RBP5.2□□□□□ -1.58
ATG4A-207ENST00000474825 RUNX1Q01196 453 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 PMS2P11Q13670 270 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 MLANAQ16655 118 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 FAM74A1Q5RGS3 127 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 ETFRF1Q6IPR1 90 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 TEPPQ6URK8 271 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 BTNL8Q6UX41 500 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 HSD17B11Q8NBQ5 300 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 FAM110DQ8TAY7 271 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-207ENST00000474825 SCGB1C1Q8TD33 95 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 SSMEM1Q8WWF3 244 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 MBD3L1Q8WWY6 194 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 MGST2Q99735 147 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 NPCDR1Q9BY65 106 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 WNT10AQ9GZT5 417 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 SLC45A2Q9UMX9 530 aa5.2□□□□□ -1.58
ATG4A-207ENST00000474825 ACANP16112 2415 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 FLNAP21333 2647 aaKnown RBP5.19□□□□□ -1.58
ATG4A-207ENST00000474825 IGKV1D-37A0A075B6S9 117 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 TRAV1-1A0A0B4J248 108 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 UBE2L5PA0A1B0GUS4 154 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 MDFIC2A0A1B0GVS7 189 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 NUDT19A8MXV4 375 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 SEC14L6B5MCN3 397 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 K7EIM0 57 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 ATP6V0E1O15342 81 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 PLXNB1O43157 2135 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 IGLV1-40P01703 118 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 IGHV4-59P01825 116 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 MBP02144 154 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 LINC00869P0C866 280 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 FGF7P21781 194 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 PPIFP30405 207 aaKnown RBP5.19□□□□□ -1.58
ATG4A-207ENST00000474825 GNB1P62873 340 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 BLOC1S1P78537 153 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 CFHR3Q02985 330 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 Q71RC1 249 aaPredicted RBP5.19□□□□□ -1.58
ATG4A-207ENST00000474825 SLC16A13Q7RTY0 426 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 TMEM219Q86XT9 240 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 OR4X1Q8NH49 305 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 ATP6V0BQ99437 205 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 SMR3AQ99954 134 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 RSG1Q9BU20 258 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 GGTLC1Q9BX51 225 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 RPRMQ9NS64 109 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 MRPL36Q9P0J6 103 aaKnown RBP5.19□□□□□ -1.58
ATG4A-207ENST00000474825 VPREB3Q9UKI3 123 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 RFNGQ9Y644 331 aa5.19□□□□□ -1.58
ATG4A-207ENST00000474825 SETD2Q9BYW2 2564 aaPredicted RBP5.18□□□□□ -1.58
ATG4A-207ENST00000474825 PSMB11A5LHX3 300 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 LINC01548A6NM66 108 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 C17orf112F2Z3M2 114 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 H3BUA1 57 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 CLDN34H7C241 214 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 SMAD7O15105 426 aaKnown RBP5.18□□□□□ -1.58
ATG4A-207ENST00000474825 AGPAT2O15120 278 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 YIF1AO95070 293 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 LY6G6DO95868 133 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 MT-CO2P00403 227 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 REG1AP05451 166 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 HIST1H1BP16401 226 aaKnown RBP5.18□□□□□ -1.58
ATG4A-207ENST00000474825 M6PRP20645 277 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 CAMLGP49069 296 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 PLP1P60201 277 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 SELENOTP62341 195 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 ZNF726P1Q15940 193 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 PXDC1Q5TGL8 231 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 SLC25A24Q6NUK1 477 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 ACSM6Q6P461 480 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 SPSB3Q6PJ21 355 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 TMEM182Q6ZP80 229 aaPredicted RBP5.18□□□□□ -1.58
ATG4A-207ENST00000474825 Q6ZS46 218 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 C19orf35Q6ZS72 473 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 Q8N2B8 174 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 RPP25LQ8N5L8 163 aaKnown RBP5.18□□□□□ -1.58
ATG4A-207ENST00000474825 ZNF709Q8N972 641 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 LFNGQ8NES3 379 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 OR2T6Q8NHC8 308 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 VN1R17PQ8TDU5 208 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 SLC35E1Q96K37 410 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 CXorf58Q96LI9 332 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 TRGV9Q99603 122 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 TXN2Q99757 166 aa5.18□□□□□ -1.58
ATG4A-207ENST00000474825 FAM103A1Q9BTL3 118 aaKnown RBP5.18□□□□□ -1.58
ATG4A-207ENST00000474825 SCRT1Q9BWW7 348 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms