RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 IL34Q6ZMJ4 242 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 ADAMTSL5Q6ZMM2 481 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 HAPLN4Q86UW8 402 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 SLC24A4Q8NFF2 622 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 OR11H7Q8NGC8 314 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 DCUN1D4Q92564 292 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 DLX4Q92988 240 aaPredicted RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 MISP3Q96FF7 219 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 CHRDL1Q9BU40 450 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 ZC4H2Q9NQZ6 224 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 C21orf62Q9NYP8 219 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 PEF1Q9UBV8 284 aaKnown RBP5.34□□□□□ -1.55
LIMD1-204ENST00000474665 CACFD1Q9UGQ2 172 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 U3KQ87 197 aa5.34□□□□□ -1.55
LIMD1-204ENST00000474665 TRBV7-1A0A0A6YYK4 115 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 OR2T8A6NH00 312 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 LINC01619G3V211 115 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 C3orf84H3BNL1 204 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 H3BP45 60 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 SSNA1O43805 119 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 OR2C1O95371 312 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 IFNA10P01566 189 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 IGKV1-17P01599 117 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 EDN2P20800 178 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 NPY1RP25929 384 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 FCGR2BP31994 310 aaPredicted RBP5.33□□□□□ -1.56
LIMD1-204ENST00000474665 GPR183P32249 361 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 RAB32Q13637 225 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 OXLD1Q5BKU9 147 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 Q5BKY6 102 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 PRSS54Q6PEW0 395 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 TMEM14EPQ6UXP3 125 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 OR1L6Q8NGR2 347 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 EEF1AKMT3Q96AZ1 226 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 PINX1Q96BK5 328 aaKnown RBP5.33□□□□□ -1.56
LIMD1-204ENST00000474665 SMIM8Q96KF7 97 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 CXorf58Q96LI9 332 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 RNF126Q9BV68 326 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 HIPK2Q9H2X6 1198 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 RANGRFQ9HD47 186 aaPredicted RBP5.33□□□□□ -1.56
LIMD1-204ENST00000474665 ENY2Q9NPA8 101 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 MGAT4CQ9UBM8 478 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 DNAH1Q9P2D7 4330 aa5.33□□□□□ -1.56
LIMD1-204ENST00000474665 IGKV1D-37A0A075B6S9 117 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 IGKV1OR2-108A0A075B7D4 117 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 IGHV3-35A0A0C4DH35 117 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 G3V3Q6 166 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 TGOLN2O43493 480 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 MED6O75586 246 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 SCGB1D2O95969 90 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 PF4P02776 101 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 OR8U8P0C7N1 319 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 IGLL1P15814 213 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 ARL3P36405 182 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 SUB1P53999 127 aaKnown RBP eCLIP5.32□□□□□ -1.56
LIMD1-204ENST00000474665 ATP5IP56385 69 aaPredicted RBP5.32□□□□□ -1.56
LIMD1-204ENST00000474665 SYNJ2BPP57105 145 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 CD69Q07108 199 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 DEFB121Q5J5C9 76 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 SPANXN5Q5MJ07 72 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 UNQ9165/PRO28630Q6UXU0 137 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 Q6ZNX1 250 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 TMEM116Q8NCL8 245 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 OR4X1Q8NH49 305 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 RNASEH2CQ8TDP1 164 aaKnown RBP5.32□□□□□ -1.56
LIMD1-204ENST00000474665 CHAC2Q8WUX2 184 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 BSCL2Q96G97 398 aaPredicted RBP5.32□□□□□ -1.56
LIMD1-204ENST00000474665 CIB3Q96Q77 187 aaPredicted RBP5.32□□□□□ -1.56
LIMD1-204ENST00000474665 RAB40CQ96S21 281 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 ATP6V0BQ99437 205 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 NMES1Q9C002 83 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 PSENENQ9NZ42 101 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 OR5AC2Q9NZP5 309 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 THYN1Q9P016 225 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 LSM5Q9Y4Y9 91 aaKnown RBP5.32□□□□□ -1.56
LIMD1-204ENST00000474665 STAB2Q8WWQ8 2551 aa5.32□□□□□ -1.56
LIMD1-204ENST00000474665 TRAV14DV4A0A0A6YYC5 116 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 IGSF23A1L1A6 192 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 TMEM213A2RRL7 107 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 FAM24AA6NFZ4 105 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 K7EIL1 84 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 TSC22D2O75157 780 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 GGCTO75223 188 aaKnown RBP5.31□□□□□ -1.56
LIMD1-204ENST00000474665 DEDDO75618 318 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 IFNA4P05014 189 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 CSN3P07498 182 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 METTL15P1P0C7V9 234 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 IGLC1P0CG04 106 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 ZP3P21754 424 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 OPRK1P41145 380 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 RND2P52198 227 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 MFAP4P55083 255 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 TAS2R30P59541 319 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 RRAS2P62070 204 aaPredicted RBP5.31□□□□□ -1.56
LIMD1-204ENST00000474665 GAMTQ14353 236 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 SLC16A13Q7RTY0 426 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 GPHB5Q86YW7 130 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 PPP1R1CQ8WVI7 109 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms