RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PRR25Q96S07 402 aa10.48□□□□□ -0.73
USF1-205ENST00000473969 PAIP2BQ9ULR5 123 aaKnown RBP10.48□□□□□ -0.73
USF1-205ENST00000473969 WI2-2373I1.2A0A1W2PRP0 233 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 C2orf70A6NJV1 201 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 PITX3O75364 302 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 ADAP1O75689 374 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 IGLV1-51P01701 117 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 IAPPP10997 89 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 FOLR2P14207 255 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 GP9P14770 177 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 SPNP16150 400 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 ELLP55199 621 aaPredicted RBP10.47□□□□□ -0.73
USF1-205ENST00000473969 RAB11AP62491 216 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 PVRIGQ6DKI7 326 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 LCN12Q6JVE5 192 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 IL34Q6ZMJ4 242 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 HAPLN4Q86UW8 402 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 OR52B4Q8NGK2 314 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 OR2K2Q8NGT1 345 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 ZNF431Q8TF32 576 aaPredicted RBP10.47□□□□□ -0.73
USF1-205ENST00000473969 MARC2Q969Z3 335 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 CHRDL1Q9BU40 450 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 C20orf24Q9BUV8 137 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 ZNF436Q9C0F3 470 aaPredicted RBP10.47□□□□□ -0.73
USF1-205ENST00000473969 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
USF1-205ENST00000473969 MEGF8Q7Z7M0 2845 aa10.47□□□□□ -0.73
USF1-205ENST00000473969 TRAV30A0A087WSZ9 112 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 A8MWP6 167 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 K7EIL1 84 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 SYNGR2O43760 224 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 CTSGP08311 255 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 SLC25A4P12235 298 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 CBLN1P23435 193 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 IAH1Q2TAA2 248 aaPredicted RBP10.46□□□□□ -0.73
USF1-205ENST00000473969 MAGT1Q9H0U3 335 aa10.46□□□□□ -0.73
USF1-205ENST00000473969 GPN1Q9HCN4 374 aaPredicted RBP10.46□□□□□ -0.73
USF1-205ENST00000473969 FAM25EA8MYX2 175 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 F8W735 103 aaPredicted RBP10.45□□□□□ -0.74
USF1-205ENST00000473969 CLN5O75503 358 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 TMEM50AO95807 157 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 NKX2-1P43699 371 aaPredicted RBP10.45□□□□□ -0.74
USF1-205ENST00000473969 TM4SF20Q53R12 229 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 UNQ9165/PRO28630Q6UXU0 137 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 C12orf45Q8N5I9 185 aaPredicted RBP10.45□□□□□ -0.74
USF1-205ENST00000473969 OR4X1Q8NH49 305 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 SEC22CQ9BRL7 303 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
USF1-205ENST00000473969 MRPL27Q9P0M9 148 aaKnown RBP10.45□□□□□ -0.74
USF1-205ENST00000473969 GSKIPQ9P0R6 139 aa10.45□□□□□ -0.74
USF1-205ENST00000473969 TMEM213A2RRL7 107 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 SCGB1D2O95969 90 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 IL5P05113 134 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 ADMP35318 185 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 IFITM3Q01628 133 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 MLANAQ16655 118 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 DEFB114Q30KQ6 69 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 ZNF600Q6ZNG1 722 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 GTSCR1Q86UQ5 136 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 GINS3Q9BRX5 216 aa10.44□□□□□ -0.74
USF1-205ENST00000473969 FNDC4Q9H6D8 234 aaPredicted RBP10.44□□□□□ -0.74
USF1-205ENST00000473969 C15orf62A8K5M9 175 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 INMT-MINDY4F8WBC2 141 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 K7EMT4 169 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 BMI1P35226 326 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 RND2P52198 227 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 ID3Q02535 119 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 CD300EQ496F6 205 aaPredicted RBP10.43□□□□□ -0.74
USF1-205ENST00000473969 RBPMS2Q6ZRY4 209 aaKnown RBP10.43□□□□□ -0.74
USF1-205ENST00000473969 NRARPQ7Z6K4 114 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 ZBTB8BQ8NAP8 495 aaPredicted RBP10.43□□□□□ -0.74
USF1-205ENST00000473969 OR4D5Q8NGN0 318 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 CACNG8Q8WXS5 425 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 ACY3Q96HD9 319 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 SLC35E1Q96K37 410 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 STRAPQ9Y3F4 350 aaKnown RBP10.43□□□□□ -0.74
USF1-205ENST00000473969 SMAD5-AS1Q9Y6J3 95 aa10.43□□□□□ -0.74
USF1-205ENST00000473969 IGHV3OR16-8A0A075B7F1 116 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 TRAV14DV4A0A0A6YYC5 116 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 MPTX1A8MV57 137 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 ZNF207O43670 478 aaKnown RBP10.42□□□□□ -0.74
USF1-205ENST00000473969 PRAF2O60831 178 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 OR10J1P30954 320 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 GPX4P36969 197 aaPredicted RBP10.42□□□□□ -0.74
USF1-205ENST00000473969 POLR2GP62487 172 aaKnown RBP eCLIP10.42□□□□□ -0.74
USF1-205ENST00000473969 CD69Q07108 199 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 SPANXN5Q5MJ07 72 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 LAMTOR1Q6IAA8 161 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 C11orf87Q6NUJ2 197 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 PRSS54Q6PEW0 395 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 BTNL8Q6UX41 500 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 SLC16A13Q7RTY0 426 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 TMEM116Q8NCL8 245 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 OR1S2Q8NGQ3 325 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 PSENENQ9NZ42 101 aa10.42□□□□□ -0.74
USF1-205ENST00000473969 PUS1Q9Y606 427 aaKnown RBP eCLIP10.42□□□□□ -0.74
USF1-205ENST00000473969 CCSO14618 274 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 SSSCA1O60232 199 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms