RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 CORTO00230 105 aa13.69□□□□□ -0.22
SNX4-204ENST00000473417 IFNA21P01568 189 aa13.69□□□□□ -0.22
SNX4-204ENST00000473417 CSN3P07498 182 aa13.69□□□□□ -0.22
SNX4-204ENST00000473417 MLANAQ16655 118 aa13.69□□□□□ -0.22
SNX4-204ENST00000473417 FAM106AQ4KMX7 169 aa13.69□□□□□ -0.22
SNX4-204ENST00000473417 C2orf83Q53S99 150 aa13.69□□□□□ -0.22
SNX4-204ENST00000473417 CHRDL1Q9BU40 450 aa13.69□□□□□ -0.22
SNX4-204ENST00000473417 LGALS9O00182 355 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 IFNA10P01566 189 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 EDN2P20800 178 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 NPY1RP25929 384 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 ADMP35318 185 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 OPRK1P41145 380 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 DEFA1P59665 94 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 DEFA3P59666 94 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 SPSB3Q6PJ21 355 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 UNQ9165/PRO28630Q6UXU0 137 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 NRARPQ7Z6K4 114 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 Q8N1Y9 231 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 UXS1Q8NBZ7 420 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 DUSP18Q8NEJ0 188 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 ZNF431Q8TF32 576 aaPredicted RBP13.68□□□□□ -0.22
SNX4-204ENST00000473417 TMEM170AQ8WVE7 144 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 RCHY1Q96PM5 261 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 ATP6V0BQ99437 205 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 MAGT1Q9H0U3 335 aa13.68□□□□□ -0.22
SNX4-204ENST00000473417 FNDC4Q9H6D8 234 aaPredicted RBP13.68□□□□□ -0.22
SNX4-204ENST00000473417 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 C3orf84H3BNL1 204 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 GNG7O60262 68 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 CTSGP08311 255 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 IAPPP10997 89 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 TXN2Q99757 166 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 GAR1Q9NY12 217 aaKnown RBP13.67□□□□□ -0.22
SNX4-204ENST00000473417 SIGLEC8Q9NYZ4 499 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 U3KQ87 197 aa13.67□□□□□ -0.22
SNX4-204ENST00000473417 C2orf70A6NJV1 201 aa13.66□□□□□ -0.22
SNX4-204ENST00000473417 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
SNX4-204ENST00000473417 MED6O75586 246 aa13.66□□□□□ -0.22
SNX4-204ENST00000473417 IGHV4-30-4P0DP06 118 aa13.66□□□□□ -0.22
SNX4-204ENST00000473417 FCGR2BP31994 310 aaPredicted RBP13.66□□□□□ -0.22
SNX4-204ENST00000473417 NPBWR1P48145 328 aa13.66□□□□□ -0.22
SNX4-204ENST00000473417 ADAMTSL5Q6ZMM2 481 aa13.66□□□□□ -0.22
SNX4-204ENST00000473417 ZNF436Q9C0F3 470 aaPredicted RBP13.66□□□□□ -0.22
SNX4-204ENST00000473417 MRPL36Q9P0J6 103 aaKnown RBP13.66□□□□□ -0.22
SNX4-204ENST00000473417 A8MZ25 164 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 CCSO14618 274 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 SYNGR2O43760 224 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 FOLR2P14207 255 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 IAH1Q2TAA2 248 aaPredicted RBP13.65□□□□□ -0.22
SNX4-204ENST00000473417 TM4SF20Q53R12 229 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 NOXA1Q86UR1 476 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 C12orf45Q8N5I9 185 aaPredicted RBP13.65□□□□□ -0.22
SNX4-204ENST00000473417 RNASEH2CQ8TDP1 164 aaKnown RBP13.65□□□□□ -0.22
SNX4-204ENST00000473417 CACNG8Q8WXS5 425 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 OR10C1Q96KK4 312 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 C19orf73Q9NVV2 129 aa13.65□□□□□ -0.22
SNX4-204ENST00000473417 IGHV3OR16-8A0A075B7F1 116 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 RPS10-NUDT3A0A1W2PQS6 291 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 TMEM213A2RRL7 107 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 WRBO00258 174 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 IL5P05113 134 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 ID3Q02535 119 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 OR4D5Q8NGN0 318 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 DYNLRB2Q8TF09 96 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 TMEM190Q8WZ59 177 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 TM2D3Q9BRN9 247 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 C20orf24Q9BUV8 137 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 PALMDQ9NP74 551 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 GSKIPQ9P0R6 139 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 PAIP2BQ9ULR5 123 aaKnown RBP13.64□□□□□ -0.23
SNX4-204ENST00000473417 SELENOKQ9Y6D0 94 aa13.64□□□□□ -0.23
SNX4-204ENST00000473417 A8MWP6 167 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 FAM25EA8MYX2 175 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 INMT-MINDY4F8WBC2 141 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 NDUFA4O00483 81 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 TMEM50AO95807 157 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 IFNA4P05014 189 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 CBLN1P23435 193 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 NKX2-1P43699 371 aaPredicted RBP13.63□□□□□ -0.23
SNX4-204ENST00000473417 POLR2GP62487 172 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNX4-204ENST00000473417 RELQ04864 619 aaPredicted RBP13.63□□□□□ -0.23
SNX4-204ENST00000473417 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 ZMAT4Q9H898 229 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
SNX4-204ENST00000473417 CSMD3Q7Z407 3707 aa13.62□□□□□ -0.23
SNX4-204ENST00000473417 CLN5O75503 358 aa13.62□□□□□ -0.23
SNX4-204ENST00000473417 YIF1AO95070 293 aa13.62□□□□□ -0.23
SNX4-204ENST00000473417 SCGB1D2O95969 90 aa13.62□□□□□ -0.23
SNX4-204ENST00000473417 PRSS54Q6PEW0 395 aa13.62□□□□□ -0.23
SNX4-204ENST00000473417 ZBTB8BQ8NAP8 495 aaPredicted RBP13.62□□□□□ -0.23
SNX4-204ENST00000473417 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
SNX4-204ENST00000473417 CIB3Q96Q77 187 aaPredicted RBP13.62□□□□□ -0.23
SNX4-204ENST00000473417 IZUMO1RA6ND01 250 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 C5orf51A6NDU8 294 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 C15orf62A8K5M9 175 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 ZNF207O43670 478 aaKnown RBP13.61□□□□□ -0.23
SNX4-204ENST00000473417 SLC25A4P12235 298 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 RND2P52198 227 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms