RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 C15orf62A8K5M9 175 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 ZNF701M0R085 212 aaPredicted RBP8.67□□□□□ -1.02
CPNE1-222ENST00000473373 IFNA10P01566 189 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 CTSGP08311 255 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 RNASE2P10153 161 aaKnown RBP8.67□□□□□ -1.02
CPNE1-222ENST00000473373 ADMP35318 185 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 TFPI2P48307 235 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 KLF9Q13886 244 aaPredicted RBP8.67□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM187Q14656 261 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 NOXA1Q86UR1 476 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 IL22RA2Q969J5 263 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 SPAG8Q99932 426 aaPredicted RBP8.67□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM231Q9H6L2 316 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 V9GYH0 126 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 IGHV3OR16-13A0A075B7E8 117 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 IGHV3-74A0A0B4J1X5 117 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 CENPXA8MT69 81 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 K7EMT4 169 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 DNASE2O00115 360 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-222ENST00000473373 P0C879 139 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 CCR6P51684 374 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 SMCO1Q147U7 214 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 ZNF79Q15937 498 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM128Q5BJH2 165 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 ETFRF1Q6IPR1 90 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 ZNF600Q6ZNG1 722 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 Q6ZRM9 215 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 CENPSQ8N2Z9 138 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 OR52E5Q8NH55 327 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 TRIM63Q969Q1 353 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 GALNT14Q96FL9 552 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 SOSTQ9BQB4 213 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 SLC25A21Q9BQT8 299 aaPredicted RBP8.66□□□□□ -1.02
CPNE1-222ENST00000473373 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 RHPN1-AS1Q9BWJ2 59 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 RBM38Q9H0Z9 239 aaKnown RBP8.66□□□□□ -1.02
CPNE1-222ENST00000473373 PUS1Q9Y606 427 aaKnown RBP eCLIP8.66□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM56-RWDD3S4R434 201 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 BIRC6Q9NR09 4857 aa8.66□□□□□ -1.02
CPNE1-222ENST00000473373 TRAV30A0A087WSZ9 112 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 LOC102724200A0A096LPH7 203 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-222ENST00000473373 A0A0B4J2A0 478 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 IGHV7-4-1A0A0J9YVY3 117 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 F8W735 103 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-222ENST00000473373 INS-IGF2F8WCM5 200 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 IFNA4P05014 189 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 C8orf88P0DMB2 117 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 NPY1RP25929 384 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
CPNE1-222ENST00000473373 RBMS2Q15434 407 aaKnown RBP8.65□□□□□ -1.02
CPNE1-222ENST00000473373 LYZL2Q7Z4W2 148 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 CCDC190Q86UF4 302 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 WFDC3Q8IUB2 231 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 MUC7Q8TAX7 377 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 DEDD2Q8WXF8 326 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 METTL26Q96S19 204 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 SHPKQ9UHJ6 478 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 SMPXQ9UHP9 88 aa8.65□□□□□ -1.02
CPNE1-222ENST00000473373 IGHV3-66A0A0C4DH42 116 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 A0A1W2PS18 150 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 C3orf84H3BNL1 204 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 TSPAN4O14817 238 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 CLN5O75503 358 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 TMEM50AO95807 157 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 LYL1P12980 280 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 NPPCP23582 126 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 RND2P52198 227 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 TCF24Q7RTU0 167 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 DTD1Q8TEA8 209 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 ACY3Q96HD9 319 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 RNF2Q99496 336 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 GGTLC1Q9BX51 225 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 RETNQ9HD89 108 aa8.64□□□□□ -1.03
CPNE1-222ENST00000473373 DUXBA0A1W2PPF3 345 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 RBMY1BA6NDE4 496 aaKnown RBP8.63□□□□□ -1.03
CPNE1-222ENST00000473373 RBMY1EA6NEQ0 496 aaKnown RBP8.63□□□□□ -1.03
CPNE1-222ENST00000473373 NAP1L6A6NFF2 107 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 CHEK1O14757 476 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 MED6O75586 246 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 HOXB5P09067 269 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 RBMY1DP0C7P1 496 aaKnown RBP8.63□□□□□ -1.03
CPNE1-222ENST00000473373 SLC25A4P12235 298 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 APOC4P55056 127 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 SUPT4H1P63272 117 aaKnown RBP8.63□□□□□ -1.03
CPNE1-222ENST00000473373 TNFRSF9Q07011 255 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 MLANAQ16655 118 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 TIGITQ495A1 244 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 OR4X1Q8NH49 305 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 RNASEH2CQ8TDP1 164 aaKnown RBP8.63□□□□□ -1.03
CPNE1-222ENST00000473373 GRAMD2BQ96HH9 432 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 CITED4Q96RK1 184 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 SRRQ9GZT4 340 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 RBKSQ9H477 322 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms