RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CXorf58Q96LI9 332 aa6.98□□□□□ -1.29
MCF2L-223ENST00000473345 SRSF8Q9BRL6 282 aaKnown RBP6.98□□□□□ -1.29
MCF2L-223ENST00000473345 C20orf24Q9BUV8 137 aa6.98□□□□□ -1.29
MCF2L-223ENST00000473345 C20orf85Q9H1P6 137 aa6.98□□□□□ -1.29
MCF2L-223ENST00000473345 DAZ1Q9NQZ3 744 aaKnown RBP6.98□□□□□ -1.29
MCF2L-223ENST00000473345 SMPXQ9UHP9 88 aa6.98□□□□□ -1.29
MCF2L-223ENST00000473345 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 TRAV6A0A075B6T7 132 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 ELOA3CA0A087WX78 387 aaPredicted RBP6.97□□□□□ -1.29
MCF2L-223ENST00000473345 TEX50A0A1B0GTY4 177 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 PRAF2O60831 178 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 CTSGP08311 255 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 BCAP31P51572 246 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 TSPAN5P62079 268 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 DHODHQ02127 395 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 POU2AF1Q16633 256 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 THOC7Q6I9Y2 204 aaKnown RBP6.97□□□□□ -1.29
MCF2L-223ENST00000473345 Q6ZTC4 211 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 SPAG16Q8N0X2 631 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 GBGT1Q8N5D6 347 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 OR4A5Q8NH83 315 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 MOB3AQ96BX8 217 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 ATP6V0BQ99437 205 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 ZNF2Q9BSG1 426 aaPredicted RBP6.97□□□□□ -1.29
MCF2L-223ENST00000473345 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 FLVCR2Q9UPI3 526 aa6.97□□□□□ -1.29
MCF2L-223ENST00000473345 IGHV4-28A0A0C4DH34 117 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 OR4C46A6NHA9 309 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 MPTX1A8MV57 137 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 NDUFA4O00483 81 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 RBFOX2O43251 390 aaKnown RBP eCLIP6.96□□□□□ -1.33e-6■■□□□ 12.5
MCF2L-223ENST00000473345 HRASP01112 189 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 PPYP01298 95 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 IGHV3-48P01763 117 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 OR13C7P0DN81 318 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 MED14OSP0DP75 135 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 C4BPBP20851 252 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 FCGR2CP31995 323 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 SCGB2B2Q4G0G5 96 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 LEMD1Q68G75 181 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 ZNF66Q6ZN08 573 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 ZNF767PQ75MW2 155 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 HSD17B13Q7Z5P4 300 aaPredicted RBP6.96□□□□□ -1.3
MCF2L-223ENST00000473345 TMEM217Q8N7C4 229 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 ZBTB34Q8NCN2 500 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 MARCH1Q8TCQ1 289 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 SECTM1Q8WVN6 248 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 RTBDNQ9BSG5 229 aaPredicted RBP6.96□□□□□ -1.3
MCF2L-223ENST00000473345 RHPN1-AS1Q9BWJ2 59 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 TMEM140Q9NV12 185 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 NSG2Q9Y328 171 aa6.96□□□□□ -1.3
MCF2L-223ENST00000473345 HSPG2P98160 4391 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 SNRPGP15A8MWD9 76 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 K7EMT4 169 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 M0R2N4 97 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 CA1P00915 261 aaPredicted RBP6.95□□□□□ -1.3
MCF2L-223ENST00000473345 SERPINE2P07093 398 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 HLA-DMBP28068 263 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 UBE2MP61081 183 aaKnown RBP6.95□□□□□ -1.3
MCF2L-223ENST00000473345 SLC25A24Q6NUK1 477 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 ZNF818PQ6ZRF7 136 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 TMEM230Q96A57 120 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 BSCL2Q96G97 398 aaPredicted RBP6.95□□□□□ -1.3
MCF2L-223ENST00000473345 ZNF486Q96H40 463 aaPredicted RBP6.95□□□□□ -1.3
MCF2L-223ENST00000473345 OR10C1Q96KK4 312 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 SCGB3A2Q96PL1 93 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 QTRT1Q9BXR0 403 aaKnown RBP6.95□□□□□ -1.3
MCF2L-223ENST00000473345 FXYD6Q9H0Q3 95 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 NDUFA4L2Q9NRX3 87 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 C21orf62Q9NYP8 219 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 THYN1Q9P016 225 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 F11RQ9Y624 299 aaKnown RBP6.95□□□□□ -1.3
MCF2L-223ENST00000473345 ALG5Q9Y673 324 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 X6R8D5 127 aa6.95□□□□□ -1.3
MCF2L-223ENST00000473345 IGHV4-4A0A075B6R2 117 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 IGHV3-66A0A0C4DH42 116 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 PRSS29PA6NIE9 313 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 C15orf62A8K5M9 175 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 IFNA4P05014 189 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 OR4E1P0C645 316 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 TRAPPC2P0DI81 140 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 TRAPPC2BP0DI82 140 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 ANXA7P20073 488 aaKnown RBP6.94□□□□□ -1.3
MCF2L-223ENST00000473345 GNRHRP30968 328 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 DEFB131AP59861 70 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 RND3P61587 244 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 TMEM128Q5BJH2 165 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 LAMTOR1Q6IAA8 161 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 LPCAT3Q6P1A2 487 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 UBAC2Q8NBM4 344 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 OR51H1Q8NH63 302 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 ZFAND1Q8TCF1 268 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 ST8SIA2Q92186 375 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 MFFQ9GZY8 342 aa6.94□□□□□ -1.3
MCF2L-223ENST00000473345 hCG_2014768A0A024R1R8 64 aa6.93□□□□□ -1.3
MCF2L-223ENST00000473345 I3L2K1 104 aa6.93□□□□□ -1.3
MCF2L-223ENST00000473345 NUPL2O15504 423 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms