RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ZNF705GA8MUZ8 300 aaPredicted RBP4.48□□□□□ -1.69
RTF1-203ENST00000473214 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 TMEM250H0YL14 139 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 H7BYZ3 331 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 J3QRK9 145 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 RBFOX2O43251 390 aaKnown RBP eCLIP4.48□□□□□ -1.69
RTF1-203ENST00000473214 LMX1BO60663 402 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 TNFSF13O75888 250 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 IGHV3-48P01763 117 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 LMO2P25791 158 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 CDKN2AP42771 156 aaKnown RBP4.48□□□□□ -1.69
RTF1-203ENST00000473214 HSD17B12Q53GQ0 312 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 HES3Q5TGS1 186 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 GLIPR1L1Q6UWM5 242 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 UNQ9165/PRO28630Q6UXU0 137 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 ZNF788Q6ZQV5 615 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 RFLNAQ6ZTI6 216 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 CSNK1G2-AS1Q8NCQ2 148 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 OR51A4Q8NGJ6 313 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 ABHD14BQ96IU4 210 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 NRTNQ99748 197 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 MED28Q9H204 178 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 C11orf68Q9H3H3 251 aaKnown RBP4.48□□□□□ -1.69
RTF1-203ENST00000473214 PTGES2Q9H7Z7 377 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 FBXL12Q9NXK8 326 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 MCTS1Q9ULC4 181 aaKnown RBP4.48□□□□□ -1.69
RTF1-203ENST00000473214 FLVCR1Q9Y5Y0 555 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 ZNF462Q96JM2 2506 aa4.48□□□□□ -1.69
RTF1-203ENST00000473214 KALRNO60229 2985 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 SPAARA0A1B0GVQ0 90 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 TRDV1A0A1B0GX56 115 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 SNAPC5O75971 98 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 TOMM40O96008 361 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 CD48P09326 243 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 CRADDP78560 199 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 BCL2L15Q5TBC7 163 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 SLC22A24Q8N4F4 322 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 C11orf42Q8N5U0 333 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 DEFB124Q8NES8 71 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 OR11G2Q8NGC1 345 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 GNPNAT1Q96EK6 184 aaPredicted RBP4.47□□□□□ -1.69
RTF1-203ENST00000473214 BORCS8Q96FH0 119 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 PGLYRP2Q96PD5 576 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 ERMAPQ96PL5 475 aaPredicted RBP4.47□□□□□ -1.69
RTF1-203ENST00000473214 OR2A5Q96R48 311 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 F2RL3Q96RI0 385 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 IMUPQ9GZP8 106 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 ZNF696Q9H7X3 374 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 CACNA1EQ15878 2313 aa4.47□□□□□ -1.69
RTF1-203ENST00000473214 PLXNB3Q9ULL4 1909 aa4.46□□□□□ -1.69
RTF1-203ENST00000473214 LRRK1Q38SD2 2015 aa4.46□□□□□ -1.69
RTF1-203ENST00000473214 IGLV4-3A0A075B6K6 122 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 TRAV19A0A0A6YYK7 116 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 PROP1O75360 226 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 MT-ND4LP03901 98 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 GPX1P07203 203 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 LINC00694P0DN24 101 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 HIST1H1BP16401 226 aaKnown RBP4.46□□□□□ -1.7
RTF1-203ENST00000473214 IL3RAP26951 378 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 IMPA1P29218 277 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 RBMXP38159 391 aaKnown RBP4.46□□□□□ -1.7
RTF1-203ENST00000473214 OPRK1P41145 380 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 FHL1Q13642 323 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 RTL8BQ17RB0 113 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 ORMDL2Q53FV1 153 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 WDR59Q6PJI9 974 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 Q6ZS49 121 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 MOB1BQ7L9L4 216 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 MKXQ8IYA7 352 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 C1orf174Q8IYL3 243 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 H1FOOQ8IZA3 346 aaPredicted RBP4.46□□□□□ -1.7
RTF1-203ENST00000473214 OR5A2Q8NGI9 324 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 OR10D4PQ8NGN7 298 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 LMX1AQ8TE12 382 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 FGF13Q92913 245 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 TMEM106AQ96A25 262 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 CCL13Q99616 98 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 SLC25A21Q9BQT8 299 aaPredicted RBP4.46□□□□□ -1.7
RTF1-203ENST00000473214 RTL8AQ9BWD3 113 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 SAMD10Q9BYL1 202 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 LHX9Q9NQ69 397 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 NUFIP1Q9UHK0 495 aaKnown RBP4.46□□□□□ -1.7
RTF1-203ENST00000473214 TEP1Q99973 2627 aaKnown RBP4.46□□□□□ -1.7
RTF1-203ENST00000473214 APC2O95996 2303 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 ASXL3Q9C0F0 2248 aa4.46□□□□□ -1.7
RTF1-203ENST00000473214 F5P12259 2224 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 USP9XQ93008 2570 aaPredicted RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 COL5A1P20908 1838 aaPredicted RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 TRAV9-1A0A075B6T8 112 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 LOC100130705A0A1B0GUX0 176 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 GABARAPH6UMI1 98 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 PEX7O00628 323 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 IGLV2-14P01704 120 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 BGLAPP02818 100 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 AKAIN1P0CW23 69 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 CSRP1P21291 193 aaKnown RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 FKBP2P26885 142 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms