RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 BSXQ3C1V8 233 aa12.27□□□□□ -0.45
USP40-212ENST00000473191 RNASE11Q8TAA1 199 aaKnown RBP12.27□□□□□ -0.45
USP40-212ENST00000473191 TMEM170AQ8WVE7 144 aa12.27□□□□□ -0.45
USP40-212ENST00000473191 TMEM230Q96A57 120 aa12.27□□□□□ -0.45
USP40-212ENST00000473191 RNF183Q96D59 192 aa12.27□□□□□ -0.45
USP40-212ENST00000473191 RRNAD1Q96FB5 475 aaKnown RBP12.27□□□□□ -0.45
USP40-212ENST00000473191 DIRAS2Q96HU8 199 aa12.27□□□□□ -0.45
USP40-212ENST00000473191 PDCD10Q9BUL8 212 aa12.27□□□□□ -0.45
USP40-212ENST00000473191 BIRC6Q9NR09 4857 aa12.27□□□□□ -0.45
USP40-212ENST00000473191 BMI1P35226 326 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 OPRK1P41145 380 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 NPBWR1P48145 328 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 ZNF600Q6ZNG1 722 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 STPG3Q8N7X2 389 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 OR51S1Q8NGJ8 323 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 C15orf40Q8WUR7 153 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 GALNT14Q96FL9 552 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 SLIRPQ9GZT3 109 aaKnown RBP12.26□□□□□ -0.45
USP40-212ENST00000473191 MS4A6AQ9H2W1 248 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 CACNG5Q9UF02 275 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 C14orf166Q9Y224 244 aaKnown RBP12.26□□□□□ -0.45
USP40-212ENST00000473191 TP53TG1Q9Y2A0 90 aa12.26□□□□□ -0.45
USP40-212ENST00000473191 KIR2DL5BA0A0G2JN68 375 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 KIR2DL5BA0A0G2JPC4 375 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 CTDSPLO15194 276 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 AKAIN1P0CW23 69 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 SSBP1Q04837 148 aaKnown RBP12.25□□□□□ -0.45
USP40-212ENST00000473191 TNFRSF9Q07011 255 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 TIGITQ495A1 244 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 AARDQ4LEZ3 155 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 TMEM268Q5VZI3 342 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 KIR2DL5AQ8N109 375 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 KIR2DL5BQ8NHK3 375 aa12.25□□□□□ -0.45
USP40-212ENST00000473191 RBPMSQ93062 196 aaKnown RBP12.25□□□□□ -0.45
USP40-212ENST00000473191 C6orf62Q9GZU0 229 aaPredicted RBP12.25□□□□□ -0.45
USP40-212ENST00000473191 CCDC59Q9P031 241 aaKnown RBP12.25□□□□□ -0.45
USP40-212ENST00000473191 ANKRD20A5PA0PJZ0 165 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 UBE2CO00762 179 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 CLN5O75503 358 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 JTBO76095 146 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 ATG12O94817 140 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 IGKV1-17P01599 117 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
USP40-212ENST00000473191 OR4X1Q8NH49 305 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 RAB2BQ8WUD1 216 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 GINS3Q9BRX5 216 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 ENY2Q9NPA8 101 aa12.24□□□□□ -0.45
USP40-212ENST00000473191 CXorf65A6NEN9 183 aa12.23□□□□□ -0.45
USP40-212ENST00000473191 H3BMQ9 156 aa12.23□□□□□ -0.45
USP40-212ENST00000473191 RPL5P46777 297 aaKnown RBP12.23□□□□□ -0.45
USP40-212ENST00000473191 SUB1P53999 127 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP40-212ENST00000473191 DEFB131AP59861 70 aa12.23□□□□□ -0.45
USP40-212ENST00000473191 SPCS3P61009 180 aa12.23□□□□□ -0.45
USP40-212ENST00000473191 RPL11P62913 178 aaKnown RBP12.23□□□□□ -0.45
USP40-212ENST00000473191 RBMS2Q15434 407 aaKnown RBP12.23□□□□□ -0.45
USP40-212ENST00000473191 SOSTQ9BQB4 213 aa12.23□□□□□ -0.45
USP40-212ENST00000473191 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
USP40-212ENST00000473191 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.23□□□□□ -0.45
USP40-212ENST00000473191 CORTO00230 105 aa12.22□□□□□ -0.45
USP40-212ENST00000473191 TNFSF8P32971 234 aa12.22□□□□□ -0.45
USP40-212ENST00000473191 TMBIM6P55061 237 aa12.22□□□□□ -0.45
USP40-212ENST00000473191 SUPT4H1P63272 117 aaKnown RBP12.22□□□□□ -0.45
USP40-212ENST00000473191 TMEM187Q14656 261 aa12.22□□□□□ -0.45
USP40-212ENST00000473191 SURF2Q15527 256 aaPredicted RBP12.22□□□□□ -0.45
USP40-212ENST00000473191 OR52E5Q8NH55 327 aa12.22□□□□□ -0.45
USP40-212ENST00000473191 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
USP40-212ENST00000473191 GSTZ1O43708 216 aaPredicted RBP12.21□□□□□ -0.45
USP40-212ENST00000473191 B3GALNT1O75752 331 aa12.21□□□□□ -0.45
USP40-212ENST00000473191 NPPCP23582 126 aa12.21□□□□□ -0.45
USP40-212ENST00000473191 CRYBB3P26998 211 aa12.21□□□□□ -0.45
USP40-212ENST00000473191 DHODHQ02127 395 aa12.21□□□□□ -0.45
USP40-212ENST00000473191 PRSS54Q6PEW0 395 aa12.21□□□□□ -0.45
USP40-212ENST00000473191 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
USP40-212ENST00000473191 LINC00476Q8WZB0 136 aa12.21□□□□□ -0.45
USP40-212ENST00000473191 HEYLQ9NQ87 328 aaPredicted RBP12.21□□□□□ -0.45
USP40-212ENST00000473191 CEBPZOSA8MTT3 80 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 MPTX1A8MV57 137 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 DNASE2O00115 360 aaPredicted RBP12.2□□□□□ -0.46
USP40-212ENST00000473191 DEFB4AO15263 64 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 IGLC1P0CG04 106 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 HTR2BP41595 481 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 RND2P52198 227 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 C2orf83Q53S99 150 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 LYZL2Q7Z4W2 148 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 PRRT1Q99946 306 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 BATF3Q9NR55 127 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 MCUBQ9NWR8 336 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 RABAC1Q9UI14 185 aa12.2□□□□□ -0.46
USP40-212ENST00000473191 KMT2AQ03164 3969 aa12.19□□□□□ -0.46
USP40-212ENST00000473191 GIG44P09565 113 aaPredicted RBP12.19□□□□□ -0.46
USP40-212ENST00000473191 AKR1C4P17516 323 aa12.19□□□□□ -0.46
USP40-212ENST00000473191 P2RY1P47900 373 aa12.19□□□□□ -0.46
USP40-212ENST00000473191 PAFAH1B2P68402 229 aa12.19□□□□□ -0.46
USP40-212ENST00000473191 NMSQ5H8A3 153 aa12.19□□□□□ -0.46
USP40-212ENST00000473191 CEMP1Q6PRD7 247 aaPredicted RBP12.19□□□□□ -0.46
USP40-212ENST00000473191 STXBP6Q8NFX7 210 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms