RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SOD1P00441 154 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 CRYBA1P05813 215 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 SNRPAP09012 282 aaKnown RBP1.66□□□□□ -2.14
XRN1-210ENST00000472697 FAM228BP0C875 321 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 CNTFRP26992 372 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 OR1E2P47887 323 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 MARCKSL1P49006 195 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 EDDM3AQ14507 147 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 YIF1BQ5BJH7 314 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 H2AFVQ71UI9 128 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 SMIM15Q7Z3B0 74 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 OSR2Q8N2R0 312 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 SLC22A24Q8N4F4 322 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 RPS4Y2Q8TD47 263 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 LXNQ9BS40 222 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 MIXL1Q9H2W2 232 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 RPP21Q9H633 154 aaKnown RBP1.66□□□□□ -2.14
XRN1-210ENST00000472697 OR5V1Q9UGF6 321 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 FREM1Q5H8C1 2179 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 MYH11P35749 1972 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 NBASA2RRP1 2371 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 ARHGAP32A7KAX9 2087 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 MYO18AQ92614 2054 aaKnown RBP1.66□□□□□ -2.14
XRN1-210ENST00000472697 COL6A5A8TX70 2615 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 COPEO14579 308 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 IFNA14P01570 189 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 MAS1P04201 325 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 NBEAP1P0C6P0 100 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 CISD3P0C7P0 127 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 CD79AP11912 226 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 CBR1P16152 277 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 PAFAH1B3Q15102 231 aaKnown RBP1.66□□□□□ -2.14
XRN1-210ENST00000472697 RHEBQ15382 184 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 SURF2Q15527 256 aaPredicted RBP1.66□□□□□ -2.14
XRN1-210ENST00000472697 FAM78BQ5VT40 261 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 SPATA12Q7Z6I5 190 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 OR5K1Q8NHB7 308 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 SLC25A46Q96AG3 418 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 ABHD14BQ96IU4 210 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 OR51I2Q9H344 312 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 HES4Q9HCC6 221 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 TMEM216Q9P0N5 145 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 TNRC6AQ8NDV7 1962 aaKnown RBP1.66□□□□□ -2.14
XRN1-210ENST00000472697 NF1P21359 2839 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 OTOGQ6ZRI0 2925 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 ANKHD1Q8IWZ3 2542 aaKnown RBP1.66□□□□□ -2.14
XRN1-210ENST00000472697 PTPRJQ12913 1337 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 NAV3Q8IVL0 2385 aa1.66□□□□□ -2.14
XRN1-210ENST00000472697 FAM92AA1XBS5 289 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 OR5H14A6NHG9 310 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 KNCNA6PVL3 124 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.65□□□□□ -2.14
XRN1-210ENST00000472697 PIRO00625 290 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 PLA2G10O15496 165 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 ZNF324O75467 553 aaPredicted RBP1.65□□□□□ -2.14
XRN1-210ENST00000472697 IFNA1P01562 189 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 CRYGDP07320 174 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 GUSBP08236 651 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 RBX1P62877 108 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 SARNPP82979 210 aaKnown RBP1.65□□□□□ -2.14
XRN1-210ENST00000472697 TNFAIP6P98066 277 aaPredicted RBP1.65□□□□□ -2.14
XRN1-210ENST00000472697 SPA17Q15506 151 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 ATP6AP1LQ52LC2 224 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 C3orf33Q6P1S2 294 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 WDR59Q6PJI9 974 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 ZNF664Q8N3J9 261 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 ANKRD29Q8N6D5 301 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 L3HYPDHQ96EM0 354 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 DCUN1D1Q96GG9 259 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 PKMYT1Q99640 499 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 RNF5Q99942 180 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 LINC00597Q9H2U6 94 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 PDFQ9HBH1 243 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 RFNGQ9Y644 331 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 U3KQA8 63 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 NUP210LQ5VU65 1888 aa1.65□□□□□ -2.14
XRN1-210ENST00000472697 IGLV1-50A0A075B6I6 118 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 IGHV3-43A0A0B4J1X8 118 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 A0A0D9SFI3 127 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 A0A1B0GV72 72 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 H3BMM0 161 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 PDE6DO43924 150 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 CSN2P05814 226 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 ZNF32P17041 273 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 CD34P28906 385 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 SNRPD2P62316 118 aaKnown RBP1.65□□□□□ -2.15
XRN1-210ENST00000472697 RHOBP62745 196 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 PSPHP78330 225 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 TMED4Q7Z7H5 227 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 DEFB119Q8N690 84 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 SLC25A40Q8TBP6 338 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 UBE2WQ96B02 151 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 KRTAP1-5Q9BYS1 174 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 KRTAP2-2Q9BYT5 123 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 FAM60AQ9NP50 221 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 DDX19AQ9NUU7 478 aaKnown RBP1.65□□□□□ -2.15
XRN1-210ENST00000472697 ZNRD1Q9P1U0 126 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 PRNDQ9UKY0 176 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 PRSS21Q9Y6M0 314 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 HIVEP1P15822 2718 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms