RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RABAC1Q9UI14 185 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 PRNDQ9UKY0 176 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 TBC1D24Q9ULP9 559 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 DNAH5Q8TE73 4624 aa6.65□□□□□ -1.34
VCL-204ENST00000472585 ERICH4A6NGS2 130 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 GNG7O60262 68 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 SNAPC5O75971 98 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 SCGNO76038 276 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 PMP2P02689 132 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 ZNF688P0C7X2 276 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 INAFM2P0DMQ5 153 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 ERVK-16P61578 105 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 RPL11P62913 178 aaKnown RBP6.64□□□□□ -1.35
VCL-204ENST00000472585 MXD1Q05195 221 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 ACTL10Q5JWF8 245 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 MORN3Q6PF18 240 aaPredicted RBP6.64□□□□□ -1.35
VCL-204ENST00000472585 TPRA1Q86W33 373 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 LYSMD2Q8IV50 215 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 TMEM56Q96MV1 263 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 RAB40CQ96S21 281 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 ZNF2Q9BSG1 426 aaPredicted RBP6.64□□□□□ -1.35
VCL-204ENST00000472585 FNDC4Q9H6D8 234 aaPredicted RBP6.64□□□□□ -1.35
VCL-204ENST00000472585 ANAPC10Q9UM13 185 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 NACAE9PAV3 2078 aa6.64□□□□□ -1.35
VCL-204ENST00000472585 CD5P06127 495 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 SPP1P10451 314 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 CRYBB3P26998 211 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 DEFB1P60022 68 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 HSPE1P61604 102 aaKnown RBP6.63□□□□□ -1.35
VCL-204ENST00000472585 PRCDQ00LT1 54 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 RNF212Q495C1 297 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 ZNF600Q6ZNG1 722 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 STXBP6Q8NFX7 210 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 GRAMD2BQ96HH9 432 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 EHFQ9NZC4 300 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 U3KQE9 123 aa6.63□□□□□ -1.35
VCL-204ENST00000472585 A0A0B4J293 547 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 IGKV1-17P01599 117 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 EIF4EP06730 217 aaKnown RBP6.62□□□□□ -1.35
VCL-204ENST00000472585 NAT1P18440 290 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 P2RY1P47900 373 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 HERV-K104P61576 105 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 PHLDA2Q53GA4 152 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 IDNKQ5T6J7 187 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 GSG1LQ6UXU4 331 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 SPARTQ8N0X7 666 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 CNBD2Q96M20 576 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 GINS3Q9BRX5 216 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 VCXQ9H320 206 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 FKBP11Q9NYL4 201 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 XCL2Q9UBD3 114 aa6.62□□□□□ -1.35
VCL-204ENST00000472585 A0A0A6YYH2 397 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 A6NJ64 397 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 GPR31O00270 319 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 IGKV1-5P01602 117 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 P0C879 139 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 RNASE2P10153 161 aaKnown RBP6.61□□□□□ -1.35
VCL-204ENST00000472585 NPPCP23582 126 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 TGFBR1P36897 503 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 TIGITQ495A1 244 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 TBC1D26Q86UD7 250 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 MRGPRFQ96AM1 343 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 FAM210BQ96KR6 192 aa6.61□□□□□ -1.35
VCL-204ENST00000472585 ZNF705FA8MVS1 300 aaPredicted RBP6.6□□□□□ -1.35
VCL-204ENST00000472585 H3BMM0 161 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 ZNF705DP0CH99 300 aaPredicted RBP6.6□□□□□ -1.35
VCL-204ENST00000472585 ZNF705BP0CI00 300 aaPredicted RBP6.6□□□□□ -1.35
VCL-204ENST00000472585 PSMB9P28065 219 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 ETV6P41212 452 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 CBX5P45973 191 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 NPBWR1P48145 328 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 SCAND1P57086 179 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 PSMG4Q5JS54 123 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 GDF5OSQ5U4N7 250 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 C16orf54Q6UWD8 224 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
VCL-204ENST00000472585 H2BFWTQ7Z2G1 175 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 SPATA12Q7Z6I5 190 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 TSPAN14Q8NG11 270 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 OR4A16Q8NH70 328 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 GLMPQ8WWB7 406 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 TSC22D3Q99576 134 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 DIABLOQ9NR28 239 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 TMED3Q9Y3Q3 217 aa6.6□□□□□ -1.35
VCL-204ENST00000472585 A0A0G2JRQ6 117 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 INS-IGF2F8WCM5 200 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 CLN5O75503 358 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 HLA-DMAP28067 261 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 HRH1P35367 487 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 EMP1P54849 157 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 FXYD7P58549 80 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 ERHP84090 104 aaKnown RBP6.59□□□□□ -1.35
VCL-204ENST00000472585 DHRS2Q13268 280 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 CMTM1Q8IZ96 169 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 C6orf223Q8N319 242 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 OR6F1Q8NGZ6 308 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 BORCS5Q969J3 196 aa6.59□□□□□ -1.35
VCL-204ENST00000472585 FAM212BQ9NTI7 297 aaPredicted RBP6.59□□□□□ -1.35
VCL-204ENST00000472585 SSR3Q9UNL2 185 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms