RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 BDP1A6H8Y1 2624 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 LINC00614P0C842 121 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CECR9P0C854 216 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TIMM23BQ5SRD1 257 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NPCDR1Q9BY65 106 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 MYOD1P15172 320 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FAM57AQ8TBR7 257 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ELOVL5Q9NYP7 299 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CELA3BP08861 270 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 GLRXP35754 106 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 JPT1Q9UK76 154 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 XIRP1Q702N8 1843 aaKnown RBP11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 IGFBP2P18065 325 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NHSQ6T4R5 1651 aa11.18□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 IGHV3-53P01767 116 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 RGPD3A6NKT7 1758 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 A0A1B0GV90 55 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ZNF79Q15937 498 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 SLC25A47Q6Q0C1 308 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 OR11H4Q8NGC9 324 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NEU4Q8WWR8 484 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 VKORC1Q9BQB6 163 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PMCHL2Q9BQD1 86 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 LAMB2P55268 1798 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ZIC4Q8N9L1 334 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CBLN4Q9NTU7 201 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CCL3L1P16619 93 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FAM19A2Q8N3H0 131 aa11.17□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ANAPC13Q9BS18 74 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TNRC6AQ8NDV7 1962 aaKnown RBP11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 IGKV1D-42A0A075B6H8 117 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NCR2O95944 276 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 SLC25A38Q96DW6 304 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 SCN7AQ01118 1682 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 M0R2P5 195 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CEACAM1P13688 526 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CXCL2P19875 107 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ID3Q02535 119 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 KIAA1551Q9HCM1 1747 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ALS2Q96Q42 1657 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FCN3O75636 299 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 UMODP07911 640 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TCTEX1D4Q5JR98 221 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TFF1P04155 84 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 GCHFRP30047 84 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 C6orf226Q5I0X4 101 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 FOXD3Q9UJU5 478 aaPredicted RBP11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CD28P10747 220 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 MPTX1A8MV57 137 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PRSS23O95084 383 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 NGFRP08138 427 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 GPX4P36969 197 aaPredicted RBP11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TXNDC17Q9BRA2 123 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PLA2G10O15496 165 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 PAX1P15863 534 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 TBR1Q16650 682 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 ACP7Q6ZNF0 438 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 IMMP2LQ96T52 175 aa11.15□□□□□ -0.62
NPHP3-ACAD11-201ENST00000471702 CSPG4Q6UVK1 2322 aa11.15□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 A0A0G2JMM0 328 aa11.15□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPB8 328 aa11.15□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRS3 328 aa11.15□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 KIR3DP1A8MWS1 328 aa11.15□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TMEM54Q969K7 222 aa11.15□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 PKIBQ9C010 78 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 CTAG1AP78358 180 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 DNAJC30Q96LL9 226 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TMEM258P61165 79 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 FER1L6-AS1Q8NA97 138 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 DPRXA6NFQ7 191 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 A0A1B0GUT8 65 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TNFRSF6BO95407 300 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 RND3P61587 244 aa11.14□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 E9PQ18 207 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TMEM256Q8N2U0 113 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 SSBP4Q9BWG4 385 aaPredicted RBP11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 SBF1O95248 1867 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 TFF3Q07654 80 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 MORN3Q6PF18 240 aaPredicted RBP11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 OR52E5Q8NH55 327 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 RBM38Q9H0Z9 239 aaKnown RBP11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 RAMP1O60894 148 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 ZP1P60852 638 aa11.13□□□□□ -0.63
NPHP3-ACAD11-201ENST00000471702 CSRP2Q16527 193 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms