RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 IP6K3Q96PC2 410 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 SPIN2AQ99865 258 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 SPIN2BQ9BPZ2 258 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 TBL1YQ9BQ87 522 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 RTL8AQ9BWD3 113 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 MRPL20Q9BYC9 149 aaKnown RBP2.47□□□□□ -2.01
SCN3A-207ENST00000471697 JPT2Q9H910 190 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 ST20Q9HBF5 79 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 TMEM106BQ9NUM4 274 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 FUT9Q9Y231 359 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF443Q9Y2A4 671 aaPredicted RBP2.47□□□□□ -2.01
SCN3A-207ENST00000471697 INSIG2Q9Y5U4 225 aa2.47□□□□□ -2.01
SCN3A-207ENST00000471697 PRG4Q92954 1404 aaPredicted RBP2.47□□□□□ -2.01
SCN3A-207ENST00000471697 DENND4CQ5VZ89 1909 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 PPLO60437 1756 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 TET2Q6N021 2002 aaPredicted RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ANKRD31Q8N7Z5 1873 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ARAP2Q8WZ64 1704 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 SETBP1Q9Y6X0 1596 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ATRNO75882 1429 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 TRBV19A0A075B6N1 114 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 A0A087X0T9 212 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 LOC102724200A0A096LPH7 203 aaPredicted RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 CCL15-CCL14A0A0B4J2E2 113 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 A0A0D9SFI3 127 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 A0A0G2JND7 137 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 NAP1L6A6NFF2 107 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 KRTAP4-16G5E9R7 235 aaPredicted RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 K7EP34 96 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 PIRO00625 290 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 TAX1BP3O14907 124 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 UQCRQO14949 82 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 PROSCO94903 275 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 DUS4LO95620 317 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 HLA-DRB1P01911 266 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 IL5P05113 134 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 TRGC1P0CF51 173 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 IGLC2P0DOY2 106 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 IGLC3P0DOY3 106 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 CPMP14384 443 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ADCYAP1P18509 176 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 CRYGSP22914 178 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 PPIBP23284 216 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 SRP14P37108 136 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ASIPP42127 132 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 FOXA1P55317 472 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 KRTAP10-12P60413 245 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 YPEL3P61236 119 aaPredicted RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 HERVK_113P61574 105 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 PLGLB1Q02325 96 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 Q0VG73 95 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 DAZ2Q13117 558 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 CATR1Q13166 79 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ERCC8Q13216 396 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ENDOGQ14249 297 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 UBE2SQ16763 222 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 RRN3P1Q2M238 152 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 CASC10Q5T4H9 136 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 HES3Q5TGS1 186 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 Q6AWC8 147 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 UNQ5815/PRO19632Q6UWF5 114 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 LCN15Q6UWW0 184 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 DAZ4Q86SG3 579 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 C1orf174Q8IYL3 243 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 DEFB107AQ8IZN7 70 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 OR10AC1Q8NH08 325 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 OR51H1Q8NH63 302 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 LMO3Q8TAP4 145 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 FAM104AQ969W3 186 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF524Q96C55 264 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 MUCL1Q96DR8 90 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 MS4A6EQ96DS6 147 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 DOCK7Q96N67 2140 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 LINC01587Q99440 93 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 SOSTQ9BQB4 213 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 TMEM243Q9BU79 118 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 TMEM147Q9BVK8 224 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 EIF5A2Q9GZV4 153 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 NAA60Q9H7X0 242 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 NPVFQ9HCQ7 196 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 DAZ1Q9NQZ3 744 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 DAZ3Q9NR90 486 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 CCL28Q9NRJ3 127 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 TXNL4BQ9NX01 149 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 AK3Q9UIJ7 227 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 PARP14Q460N5 1801 aa2.46□□□□□ -2.02
SCN3A-207ENST00000471697 HELZP42694 1942 aaKnown RBP2.46□□□□□ -2.02
SCN3A-207ENST00000471697 RALGAPA2Q2PPJ7 1873 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 NLRC5Q86WI3 1866 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 SHANK3Q9BYB0 1731 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 TIAM1Q13009 1591 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 CEP170Q5SW79 1584 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 NRKQ7Z2Y5 1582 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 UGGT1Q9NYU2 1555 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 GON4LQ3T8J9 2241 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 KIAA1671Q9BY89 1806 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 EDC4Q6P2E9 1401 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 WIZO95785 1651 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 QRICH2Q9H0J4 1663 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 hCG_1818297A0A087WSY0 165 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms