RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 OPRK1P41145 380 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
SDC3-203ENST00000471567 OR52B4Q8NGK2 314 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 OR2K2Q8NGT1 345 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 MRAPQ8TCY5 172 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 ZNF431Q8TF32 576 aaPredicted RBP11.62□□□□□ -0.55
SDC3-203ENST00000471567 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
SDC3-203ENST00000471567 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
SDC3-203ENST00000471567 UFC1Q9Y3C8 167 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 IGHV3-48P01763 117 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 IL5P05113 134 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 SLC25A4P12235 298 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 FOLR2P14207 255 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 SPNP16150 400 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 ID3Q02535 119 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 DCTN2Q13561 401 aaKnown RBP11.61□□□□□ -0.55
SDC3-203ENST00000471567 ETFRF1Q6IPR1 90 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 UNQ9165/PRO28630Q6UXU0 137 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 ADAMTSL5Q6ZMM2 481 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 OR4X1Q8NH49 305 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 MARC2Q969Z3 335 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 TECRQ9NZ01 308 aaKnown RBP11.61□□□□□ -0.55
SDC3-203ENST00000471567 SORL1Q92673 2214 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 DNAH3Q8TD57 4116 aa11.61□□□□□ -0.55
SDC3-203ENST00000471567 IGHV3-35A0A0C4DH35 117 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 TMEM213A2RRL7 107 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 SYNGR2O43760 224 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 CLN5O75503 358 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 SCGB2A1O75556 95 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 TMEM50AO95807 157 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 CBLN1P23435 193 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 MLANAQ16655 118 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 SEC22CQ9BRL7 303 aa11.6□□□□□ -0.55
SDC3-203ENST00000471567 TRAV30A0A087WSZ9 112 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 MPTX1A8MV57 137 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 K7EMT4 169 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 RPP30P78346 268 aaKnown RBP11.59□□□□□ -0.55
SDC3-203ENST00000471567 TM4SF20Q53R12 229 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 C11orf87Q6NUJ2 197 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 NRARPQ7Z6K4 114 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 HAPLN4Q86UW8 402 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 C12orf45Q8N5I9 185 aaPredicted RBP11.59□□□□□ -0.55
SDC3-203ENST00000471567 OR4D5Q8NGN0 318 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 DYNLRB2Q8TF09 96 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 PRR25Q96S07 402 aa11.59□□□□□ -0.55
SDC3-203ENST00000471567 MRPL27Q9P0M9 148 aaKnown RBP11.59□□□□□ -0.55
SDC3-203ENST00000471567 C15orf62A8K5M9 175 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 IFNA4P05014 189 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 IAPPP10997 89 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 GP9P14770 177 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 NKX2-1P43699 371 aaPredicted RBP11.58□□□□□ -0.56
SDC3-203ENST00000471567 RAB11AP62491 216 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 IAH1Q2TAA2 248 aaPredicted RBP11.58□□□□□ -0.56
SDC3-203ENST00000471567 DEFB114Q30KQ6 69 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 PRSS54Q6PEW0 395 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 UXS1Q8NBZ7 420 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 TMEM116Q8NCL8 245 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 ZNF414Q96IQ9 312 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 OR10C1Q96KK4 312 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 MAGT1Q9H0U3 335 aa11.58□□□□□ -0.56
SDC3-203ENST00000471567 GPN1Q9HCN4 374 aaPredicted RBP11.58□□□□□ -0.56
SDC3-203ENST00000471567 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
SDC3-203ENST00000471567 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
SDC3-203ENST00000471567 WRBO00258 174 aa11.57□□□□□ -0.56
SDC3-203ENST00000471567 PRAF2O60831 178 aa11.57□□□□□ -0.56
SDC3-203ENST00000471567 GPX4P36969 197 aaPredicted RBP11.57□□□□□ -0.56
SDC3-203ENST00000471567 CD69Q07108 199 aa11.57□□□□□ -0.56
SDC3-203ENST00000471567 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
SDC3-203ENST00000471567 ZNF600Q6ZNG1 722 aa11.57□□□□□ -0.56
SDC3-203ENST00000471567 ZBTB8BQ8NAP8 495 aaPredicted RBP11.57□□□□□ -0.56
SDC3-203ENST00000471567 MARVELD1Q9BSK0 173 aa11.57□□□□□ -0.56
SDC3-203ENST00000471567 C20orf24Q9BUV8 137 aa11.57□□□□□ -0.56
SDC3-203ENST00000471567 LSM4Q9Y4Z0 139 aaKnown RBP11.57□□□□□ -0.56
SDC3-203ENST00000471567 SNRPGP15A8MWD9 76 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 INMT-MINDY4F8WBC2 141 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 YIF1AO95070 293 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 EDN2P20800 178 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 RND2P52198 227 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 POLR2GP62487 172 aaKnown RBP eCLIP11.56□□□□□ -0.56
SDC3-203ENST00000471567 CD300EQ496F6 205 aaPredicted RBP11.56□□□□□ -0.56
SDC3-203ENST00000471567 SLC16A13Q7RTY0 426 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 OR1S2Q8NGQ3 325 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 CACNG8Q8WXS5 425 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 GSKIPQ9P0R6 139 aa11.56□□□□□ -0.56
SDC3-203ENST00000471567 IGKV1-17P01599 117 aa11.55□□□□□ -0.56
SDC3-203ENST00000471567 SMIM8Q96KF7 97 aa11.55□□□□□ -0.56
SDC3-203ENST00000471567 GINS3Q9BRX5 216 aa11.55□□□□□ -0.56
SDC3-203ENST00000471567 MLXQ9UH92 298 aa11.55□□□□□ -0.56
SDC3-203ENST00000471567 STRAPQ9Y3F4 350 aaKnown RBP11.55□□□□□ -0.56
SDC3-203ENST00000471567 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 IZUMO1RA6ND01 250 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 C5orf51A6NDU8 294 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 CCSO14618 274 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 IGLC1P0CG04 106 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 OR10J1P30954 320 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 TAS2R30P59541 319 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms