RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SLC25A21Q9BQT8 299 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 HDHD3Q9BSH5 251 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 GAL3ST2Q9H3Q3 398 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 LINC00574Q9H8X3 128 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 TAF9BQ9HBM6 251 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 HRASLSQ9HDD0 168 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 NECAP2Q9NVZ3 263 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 COPZ2Q9P299 210 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF230Q9UIE0 474 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 KIF25Q9UIL4 384 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 SCP2D1Q9UJQ7 156 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 LINC00312Q9Y6C7 94 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 YLPM1P49750 1951 aaKnown RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 WNK2Q9Y3S1 2297 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 HECTD1Q9ULT8 2610 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 NACAE9PAV3 2078 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 IGKV1D-8A0A087WSZ0 117 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 TRBV6-7A0A0A0MS04 114 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 A0A1B0GW55 424 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 A0A1W2PRD5 423 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF729A6NN14 1252 aaPredicted RBP3.49□□□□□ -1.85
CCDC39-202ENST00000471307 C12orf77C9JDV5 145 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 RAB29O14966 203 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 FABP7O15540 132 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 IGHV2-5P01817 119 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 HBZP02008 142 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 PMP2P02689 132 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 GAPDHP04406 335 aaKnown RBP3.49□□□□□ -1.85
CCDC39-202ENST00000471307 SCTP09683 121 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 DUX4L2P0CJ85 424 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 DUX4L3P0CJ86 424 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 DUX4L5P0CJ88 424 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 DUX4L6P0CJ89 424 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 DUX4L7P0CJ90 424 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 OR5H8P0DN80 308 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 SLC25A16P16260 332 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 SLC6A1P30531 599 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 HRH1P35367 487 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 GLP1RP43220 463 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 HLA-DRB3P79483 266 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 EDDM3AQ14507 147 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 HMGN3Q15651 99 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 CLEC12BQ2HXU8 276 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 LY6G6FQ5SQ64 297 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 OR52W1Q6IF63 320 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 LPCAT3Q6P1A2 487 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 DUX4L9Q6RFH8 374 aaPredicted RBP3.49□□□□□ -1.85
CCDC39-202ENST00000471307 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 LY6G5BQ8NDX9 201 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 OR51S1Q8NGJ8 323 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 OR4C16Q8NGL9 310 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 OR10J5Q8NHC4 309 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 TERB2Q8NHR7 220 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 ENKURQ8TC29 256 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 MAFIPQ8WZ33 124 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 H1FXQ92522 213 aaKnown RBP3.49□□□□□ -1.85
CCDC39-202ENST00000471307 ARL11Q969Q4 196 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 SCGB3A2Q96PL1 93 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 BPESC1Q9GZL8 116 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 TOLLIPQ9H0E2 274 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 MCUBQ9NWR8 336 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 DUX4Q9UBX2 424 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 KCNIP3Q9Y2W7 256 aa3.49□□□□□ -1.85
CCDC39-202ENST00000471307 TRAV39A0A0B4J263 110 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 IGKV1-6A0A0C4DH72 117 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 A0A1B0GUS0 222 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 C17orf98A8MV24 154 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 C15orf65H3BRN8 121 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 TEX46H3BTG2 121 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 SDCBPO00560 298 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ITGB1BP1O14713 200 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 PPP1R2P9O14990 202 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 BET1O15155 118 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 YPEL1O60688 119 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 FOXH1O75593 365 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 FCN3O75636 299 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 SLC22A5O76082 557 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 NDUFB6O95139 128 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 RBP4P02753 201 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 TCRBP04435 133 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF728P0DKX0 622 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 USF1P22415 310 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 BTCP35070 178 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 CEACAM6P40199 344 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 SURF2Q15527 256 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 MRPL23Q16540 153 aaKnown RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 TIGITQ495A1 244 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 SCGB2B2Q4G0G5 96 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF660Q6AZW8 331 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 PLET1Q6UQ28 207 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 HEPN1Q6WQI6 88 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 IDO2Q6ZQW0 420 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 LHFPL1Q86WI0 220 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 H1FOOQ8IZA3 346 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ZDHHC22Q8N966 263 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 INO80EQ8NBZ0 244 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 OR56B4Q8NH76 319 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 CLDND2Q8NHS1 167 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ZFAND1Q8TCF1 268 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 CREB3L1Q96BA8 519 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms