RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 SSX3Q99909 188 aa6.61□□□□□ -1.35
FDPS-209ENST00000471117 VSIRQ9H7M9 311 aa6.61□□□□□ -1.35
FDPS-209ENST00000471117 NPVFQ9HCQ7 196 aa6.61□□□□□ -1.35
FDPS-209ENST00000471117 C1RLQ9NZP8 487 aa6.61□□□□□ -1.35
FDPS-209ENST00000471117 A0A1B0GV50 99 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 NCBP2LA6PVI3 153 aaKnown RBP6.6□□□□□ -1.35
FDPS-209ENST00000471117 H3BUX3 64 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 MBP02144 154 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 APELAP0DMC3 54 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 RAB2AP61019 212 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 AKR1C1Q04828 323 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 CD69Q07108 199 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 SCGB2A2Q13296 93 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 FXYD3Q14802 87 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 MLANAQ16655 118 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 DEFB112Q30KQ8 113 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 SPSB3Q6PJ21 355 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 TEPPQ6URK8 271 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 UQCC3Q6UW78 93 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 TMEM144Q7Z5S9 345 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
FDPS-209ENST00000471117 COMMD1Q8N668 190 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 BPIFCQ8NFQ6 507 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 RNASEH2CQ8TDP1 164 aaKnown RBP6.6□□□□□ -1.35
FDPS-209ENST00000471117 ABHD5Q8WTS1 349 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 SSMEM1Q8WWF3 244 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 CACNG8Q8WXS5 425 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 RCC1LQ96I51 464 aaKnown RBP6.6□□□□□ -1.35
FDPS-209ENST00000471117 FAM210AQ96ND0 272 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 MGST2Q99735 147 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 GGTLC1Q9BX51 225 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 PITPNC1Q9UKF7 332 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 LSM4Q9Y4Z0 139 aaKnown RBP6.6□□□□□ -1.35
FDPS-209ENST00000471117 SOX21Q9Y651 276 aaPredicted RBP6.6□□□□□ -1.35
FDPS-209ENST00000471117 CMYA5Q8N3K9 4069 aa6.6□□□□□ -1.35
FDPS-209ENST00000471117 MDFIC2A0A1B0GVS7 189 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 BTBD17A6NE02 478 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 HBE1P02100 147 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 OPRK1P41145 380 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 MFAP2P55001 183 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 CCL20P78556 96 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
FDPS-209ENST00000471117 RAB31Q13636 194 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 GAMTQ14353 236 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 ZNF726P1Q15940 193 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 ACOT6Q3I5F7 207 aaPredicted RBP6.59□□□□□ -1.35
FDPS-209ENST00000471117 MIC13Q5XKP0 118 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 PVRIGQ6DKI7 326 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 ZNF562Q6V9R5 426 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 C19orf35Q6ZS72 473 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 SLC16A13Q7RTY0 426 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 Q8N9W7 124 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 ZNF114Q8NC26 417 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 LFNGQ8NES3 379 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 OR10G4Q8NGN3 311 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 OR10G9Q8NGN4 311 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 OR10G7Q8NGN6 311 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 OR1P1Q8NH06 330 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 OR5R1Q8NH85 324 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 SFT2D1Q8WV19 159 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 MBD3L1Q8WWY6 194 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 C22orf15Q8WYQ4 148 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 SLC35E1Q96K37 410 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 LINC00052Q96N35 136 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 SRSF8Q9BRL6 282 aaKnown RBP6.59□□□□□ -1.35
FDPS-209ENST00000471117 SLC25A33Q9BSK2 321 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 FNDC4Q9H6D8 234 aaPredicted RBP6.59□□□□□ -1.35
FDPS-209ENST00000471117 TMEM231Q9H6L2 316 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 TREM1Q9NP99 234 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
FDPS-209ENST00000471117 TRAV1-1A0A0B4J248 108 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 A6NDX4 124 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 KRBOX1C9JBD0 128 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 SOX15O60248 233 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 YIF1AO95070 293 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 CD5P06127 495 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 M6PRP20645 277 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 ZP3P21754 424 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 CX3CL1P78423 397 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 LY6EQ16553 131 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 GUK1Q16774 197 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 FAM122CQ6P4D5 195 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 LCN15Q6UWW0 184 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 Q6YL49 198 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 SSX7Q7RTT5 188 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 RPP25LQ8N5L8 163 aaKnown RBP6.58□□□□□ -1.36
FDPS-209ENST00000471117 OR2T6Q8NHC8 308 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 PIFOQ8TCI5 191 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 MISP3Q96FF7 219 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 ACY3Q96HD9 319 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 NARS2Q96I59 477 aaKnown RBP6.58□□□□□ -1.36
FDPS-209ENST00000471117 RBM14Q96PK6 669 aaKnown RBP6.58□□□□□ -1.36
FDPS-209ENST00000471117 RASL11BQ9BPW5 248 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 SCRT1Q9BWW7 348 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 ACTR3CQ9C0K3 210 aaPredicted RBP6.58□□□□□ -1.36
FDPS-209ENST00000471117 KCNIP2Q9NS61 270 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 SLC39A9Q9NUM3 307 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 SLC45A2Q9UMX9 530 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 MOB4Q9Y3A3 225 aa6.58□□□□□ -1.36
FDPS-209ENST00000471117 F11RQ9Y624 299 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms