RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 MT-ND4P03905 459 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CT45A6P0DMU7 189 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CT45A5P0DMU8 189 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CT45A7P0DMV0 189 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 PSMB6P28072 239 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 MIPP30301 263 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 MT4P47944 62 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 SERPINB8P50452 374 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 RWDD2BP57060 319 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TAS2R43P59537 309 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 UBE2G2P60604 165 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 UBE2KP61086 200 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ATP6V0D1P61421 351 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ELF3P78545 371 aaPredicted RBP1.11□□□□□ -2.23
ITGA6-209ENST00000470259 H3F3AP84243 136 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 NAB1Q13506 487 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 C1DQ13901 141 aaKnown RBP1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TRAM2Q15035 370 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 PDK2Q15119 407 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TNXAQ16473 311 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 PSG3Q16557 428 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ATP6V1FQ16864 119 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TPRXLQ17RH7 258 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 RPEL1Q2QD12 228 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 SLC36A2Q495M3 483 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CT45A1Q5HYN5 189 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 NCBP2-AS2Q69YL0 99 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 SPINK6Q6UWN8 80 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 FAM131AQ6UXB0 335 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 MBOAT2Q6ZWT7 520 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 SLC35D2Q76EJ3 337 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 APRG1Q8IVJ8 170 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 C10orf111Q8N326 155 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ZNF565Q8N9K5 539 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CYB561A3Q8NBI2 242 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 OR11H6Q8NGC7 330 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 OR6N2Q8NGY6 317 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CT45A3Q8NHU0 189 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ACTL9Q8TC94 416 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CASTOR1Q8WTX7 329 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 BAALCQ8WXS3 180 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TMEM234Q8WY98 164 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CDKL2Q92772 493 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 DPH3Q96FX2 82 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 CENPNQ96H22 339 aaPredicted RBP1.11□□□□□ -2.23
ITGA6-209ENST00000470259 OR52E6Q96RD3 313 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ZNF251Q9BRH9 671 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 C7orf50Q9BRJ6 194 aaKnown RBP1.11□□□□□ -2.23
ITGA6-209ENST00000470259 COPS4Q9BT78 406 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 MAP1LC3CQ9BXW4 147 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 SYT4Q9H2B2 425 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ARMC7Q9H6L4 198 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TMEM100Q9NV29 134 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 MCUBQ9NWR8 336 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 USE1Q9NZ43 259 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 RWDD2AQ9UIY3 292 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 RCL1Q9Y2P8 373 aaKnown RBP1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TIMM22Q9Y584 194 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 ZNF780BQ9Y6R6 833 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 V9GYY9 64 aa1.11□□□□□ -2.23
ITGA6-209ENST00000470259 TRAV41A0A0B4J266 112 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 PVALEFA0A1B0GWK0 134 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 TVP23AA6NH52 213 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 CLDN24A6NM45 220 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 HACD1B0YJ81 288 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 G3V318 75 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 H3BN98 237 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 C15orf65H3BRN8 121 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 ITGB1BP1O14713 200 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 MPDU1O75352 247 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 OR2A4O95047 310 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 VAPBO95292 243 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 TNFAIP8O95379 198 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 FADS2O95864 444 aaKnown RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 PTTG1O95997 202 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 MMP7P09237 267 aaPredicted RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 OCMP0CE72 109 aaPredicted RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 PET100P0DJ07 73 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 CCL3L1P16619 93 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 CSNK2A2P19784 350 aaPredicted RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 SYT1P21579 422 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 BGNP21810 368 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 FKBP2P26885 142 aaKnown RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 CASP1P29466 404 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 S100A5P33763 92 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 GABRA3P34903 492 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 POLR2IP36954 125 aaKnown RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 MAGEA6P43360 314 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 RANBP1P43487 201 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 HAAOP46952 286 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 TTPAP49638 278 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 TPPP2P59282 170 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 RPL31P62899 125 aaKnown RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 ZNF117Q03924 483 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 IFFO1Q0D2I5 559 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 GNA13Q14344 377 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 PAFAH1B3Q15102 231 aaKnown RBP1.1□□□□□ -2.23
ITGA6-209ENST00000470259 NDUFAF6Q330K2 333 aa1.1□□□□□ -2.23
ITGA6-209ENST00000470259 TMPRSS11AQ6ZMR5 421 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms