RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 C10orf105Q8TEF2 133 aa1.23□□□□□ -2.21
VPS8-220ENST00000469713 FAM172AQ8WUF8 416 aa1.23□□□□□ -2.21
VPS8-220ENST00000469713 NIPSNAP1Q9BPW8 284 aa1.23□□□□□ -2.21
VPS8-220ENST00000469713 C14orf105Q9NVL8 296 aa1.23□□□□□ -2.21
VPS8-220ENST00000469713 FAM32AQ9Y421 112 aaKnown RBP1.23□□□□□ -2.21
VPS8-220ENST00000469713 V9GYQ6 96 aa1.23□□□□□ -2.21
VPS8-220ENST00000469713 EIF3AQ14152 1382 aaKnown RBP1.22□□□□□ -2.21
VPS8-220ENST00000469713 HECW1Q76N89 1606 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 FAM159BA6NKW6 160 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 H3BQV1 296 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 PMP2P02689 132 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H2BOP23527 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H2BBP33778 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 ZNF80P51504 273 aaPredicted RBP1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H2BDP58876 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 TAS2R41P59536 307 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H2BCP62807 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HBA1P69905 142 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 CDK5R1Q15078 307 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST2H2BEQ16778 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.22□□□□□ -2.21
VPS8-220ENST00000469713 UNQ6190/PRO20217Q6UXQ8 127 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 C12orf45Q8N5I9 185 aaPredicted RBP1.22□□□□□ -2.21
VPS8-220ENST00000469713 TEX47Q8TBZ9 253 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 MRPL30Q8TCC3 161 aaKnown RBP1.22□□□□□ -2.21
VPS8-220ENST00000469713 RASSF5Q8WWW0 418 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 C11orf40Q8WZ69 217 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H2BHQ93079 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 BORCS7Q96B45 105 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H2BNQ99877 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H2BMQ99879 126 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 ADAT1Q9BUB4 502 aaKnown RBP1.22□□□□□ -2.21
VPS8-220ENST00000469713 ULBP3Q9BZM4 244 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 TRABDQ9H4I3 376 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 ENY2Q9NPA8 101 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 PRTFDC1Q9NRG1 225 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 ARMC1Q9NVT9 282 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 MYH3P11055 1940 aa1.22□□□□□ -2.21
VPS8-220ENST00000469713 GLI3P10071 1580 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 HELZ2Q9BYK8 2649 aaKnown RBP1.21□□□□□ -2.22
VPS8-220ENST00000469713 NEO1Q92859 1461 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 IGKV3D-7A0A0C4DH55 119 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 IGKV3OR2-268A0A0C4DH90 116 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 hADV38S2A0JD32 116 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 MRPS14O60783 128 aaKnown RBP1.21□□□□□ -2.22
VPS8-220ENST00000469713 OR7C1O76099 320 aaPredicted RBP1.21□□□□□ -2.22
VPS8-220ENST00000469713 CLPSP04118 112 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 METTL15P1P0C7V9 234 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 DEFA3P59666 94 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 LIN52Q52LA3 116 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 TRIQKQ629K1 86 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 RPL22L1Q6P5R6 122 aaKnown RBP1.21□□□□□ -2.22
VPS8-220ENST00000469713 TMED4Q7Z7H5 227 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 TAC4Q86UU9 113 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 RPS19BP1Q86WX3 136 aaKnown RBP1.21□□□□□ -2.22
VPS8-220ENST00000469713 Q8N2B8 174 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 SMIM20Q8N5G0 67 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 ANKRD29Q8N6D5 301 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 OR52L1Q8NGH7 329 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 TMEM106AQ96A25 262 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 RETNLBQ9BQ08 111 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 TMEM147Q9BVK8 224 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 KIFC1Q9BW19 673 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 TRIM4Q9C037 500 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 PCBD2Q9H0N5 130 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 NMNAT1Q9HAN9 279 aaPredicted RBP1.21□□□□□ -2.22
VPS8-220ENST00000469713 UQCC1Q9NVA1 299 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 FBXL12Q9NXK8 326 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 OPTCQ9UBM4 332 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 UTP11Q9Y3A2 253 aaKnown RBP1.21□□□□□ -2.22
VPS8-220ENST00000469713 SETD5Q9C0A6 1442 aa1.21□□□□□ -2.22
VPS8-220ENST00000469713 HEATR5BQ9P2D3 2071 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 BRWD1Q9NSI6 2320 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 EXOC1LA0A1B0GW35 172 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 GNG14A0A1W2PPG7 69 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 TMEM212A6NML5 194 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 PDE6DO43924 150 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 OR2B3O76000 313 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 ARL14EPLP0DKL9 152 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 KRTAP10-4P60372 401 aaPredicted RBP1.2□□□□□ -2.22
VPS8-220ENST00000469713 C12orf74Q32Q52 190 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 LCN15Q6UWW0 184 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 SMIM15Q7Z3B0 74 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 BPIFA4PQ86YQ2 179 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 WFDC11Q8NEX6 87 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 OR51A2Q8NGJ7 313 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 MCFD2Q8NI22 146 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 BTF3L4Q96K17 158 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 CMSS1Q9BQ75 279 aaKnown RBP1.2□□□□□ -2.22
VPS8-220ENST00000469713 YIPF3Q9GZM5 350 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 C20orf27Q9GZN8 174 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 C11orf68Q9H3H3 251 aaKnown RBP1.2□□□□□ -2.22
VPS8-220ENST00000469713 CENPHQ9H3R5 247 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 SS18L2Q9UHA2 77 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 UFC1Q9Y3C8 167 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 SOX21Q9Y651 276 aaPredicted RBP1.2□□□□□ -2.22
VPS8-220ENST00000469713 TMEM56-RWDD3S4R434 201 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 MYH2Q9UKX2 1941 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 DOCK3Q8IZD9 2030 aa1.2□□□□□ -2.22
VPS8-220ENST00000469713 SCN10AQ9Y5Y9 1956 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms