RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 DMRT1Q9Y5R6 373 aa15.38■□□□□ 0.05
VIM-203ENST00000469543 AREGP15514 252 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 CD33P20138 364 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 USF1P22415 310 aaPredicted RBP15.37■□□□□ 0.05
VIM-203ENST00000469543 APOBEC3AP31941 199 aaPredicted RBP15.37■□□□□ 0.05
VIM-203ENST00000469543 ERVFC1-1P60608 527 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 TMEM167AQ8TBQ9 72 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 TMEM186Q96B77 213 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 SLC35E1Q96K37 410 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 GSX1Q9H4S2 264 aaPredicted RBP15.37■□□□□ 0.05
VIM-203ENST00000469543 WASHC3Q9Y3C0 194 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 PATE2Q6UY27 113 aa15.37■□□□□ 0.05
VIM-203ENST00000469543 TECRQ9NZ01 308 aaKnown RBP15.37■□□□□ 0.05
VIM-203ENST00000469543 DLL1O00548 723 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 GZMBP10144 247 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 CD99P14209 185 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 COX7A1P24310 79 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 SGK494Q96LW2 274 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 PSMB11A5LHX3 300 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 VSTM5A8MXK1 200 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 MOSP00540 346 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 MFAP2P55001 183 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 FAM167A-AS1Q96KT0 104 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 SLC25A2Q9BXI2 301 aa15.36■□□□□ 0.05
VIM-203ENST00000469543 IGKV1D-37A0A075B6S9 117 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 CA1P00915 261 aaPredicted RBP15.35■□□□□ 0.05
VIM-203ENST00000469543 CD3EP07766 207 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 PRB4P10163 310 aaPredicted RBP15.35■□□□□ 0.05
VIM-203ENST00000469543 ADMP35318 185 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 PPOXP50336 477 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 CNN1P51911 297 aaKnown RBP15.35■□□□□ 0.05
VIM-203ENST00000469543 LCN2P80188 198 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 PDPNQ86YL7 162 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 TMEM133Q9H2Q1 129 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 MT-CO2P00403 227 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 OR5G3P0C626 314 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 GNG4P50150 75 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 TCL1AP56279 114 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 TMEM30BQ3MIR4 351 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 MUC15Q8N387 334 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 OR5AU1Q8NGC0 362 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 TXNDC17Q9BRA2 123 aa15.35■□□□□ 0.05
VIM-203ENST00000469543 MISP3Q96FF7 219 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 DNAJC4Q9NNZ3 241 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 NGBQ9NPG2 151 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 TRAV34A0A0B4J273 112 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 FNDC10F2Z333 226 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 NDUFS6O75380 124 aaKnown RBP15.34■□□□□ 0.05
VIM-203ENST00000469543 C11orf52Q96A22 123 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 VKORC1Q9BQB6 163 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 ZNF355PQ9NSJ1 428 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 HIVEP3Q5T1R4 2406 aa15.34■□□□□ 0.05
VIM-203ENST00000469543 IGHV2-26A0A0B4J1V2 119 aa15.33■□□□□ 0.05
VIM-203ENST00000469543 ZNF705GA8MUZ8 300 aaPredicted RBP15.33■□□□□ 0.05
VIM-203ENST00000469543 C8orf88P0DMB2 117 aa15.33■□□□□ 0.05
VIM-203ENST00000469543 ORM2P19652 201 aa15.33■□□□□ 0.05
VIM-203ENST00000469543 TNXAQ16473 311 aa15.33■□□□□ 0.05
VIM-203ENST00000469543 OR8I2Q8N0Y5 310 aa15.33■□□□□ 0.05
VIM-203ENST00000469543 KAAG1Q9UBP8 84 aa15.33■□□□□ 0.05
VIM-203ENST00000469543 RAXQ9Y2V3 346 aa15.33■□□□□ 0.05
VIM-203ENST00000469543 C22orf46C9J442 243 aa15.33■□□□□ 0.04
VIM-203ENST00000469543 H3BTX0 84 aa15.33■□□□□ 0.04
VIM-203ENST00000469543 CD24P25063 80 aa15.33■□□□□ 0.04
VIM-203ENST00000469543 UBE2L3P68036 154 aaKnown RBP15.33■□□□□ 0.04
VIM-203ENST00000469543 LDLRAD2Q5SZI1 272 aa15.33■□□□□ 0.04
VIM-203ENST00000469543 ZNF841Q6ZN19 808 aa15.33■□□□□ 0.04
VIM-203ENST00000469543 V9GYV3 84 aa15.33■□□□□ 0.04
VIM-203ENST00000469543 FCN1O00602 326 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 MGST1P10620 155 aaKnown RBP15.32■□□□□ 0.04
VIM-203ENST00000469543 COA6Q5JTJ3 125 aaKnown RBP15.32■□□□□ 0.04
VIM-203ENST00000469543 LEMD1Q68G75 181 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 MMD2Q8IY49 270 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 TMEM167BQ9NRX6 74 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 F2Z2F3 143 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 IER3P46695 156 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 PDLIM4P50479 330 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 PRR31Q5SQ13 230 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 CACNG8Q8WXS5 425 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 FAM168AQ92567 244 aa15.32■□□□□ 0.04
VIM-203ENST00000469543 IGLC7A0M8Q6 106 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 CCL21O00585 134 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 LINC00311Q8N616 119 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 VSTM2AQ8TAG5 236 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 ZNF596Q8TC21 504 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 B9A039 149 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 RBPJQ06330 500 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 ST6GALNAC3Q8NDV1 305 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 IL36BQ9NZH7 164 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 INSIG2Q9Y5U4 225 aa15.31■□□□□ 0.04
VIM-203ENST00000469543 A0A087X0M5 115 aa15.3■□□□□ 0.04
VIM-203ENST00000469543 A0A1B0GX30 115 aa15.3■□□□□ 0.04
VIM-203ENST00000469543 COX7A2P2O60397 106 aa15.3■□□□□ 0.04
VIM-203ENST00000469543 IGLV2-8P01709 118 aa15.3■□□□□ 0.04
VIM-203ENST00000469543 IGLV1-47P01700 117 aa15.3■□□□□ 0.04
VIM-203ENST00000469543 GPX4P36969 197 aaPredicted RBP15.3■□□□□ 0.04
VIM-203ENST00000469543 RANP62826 216 aaKnown RBP15.3■□□□□ 0.04
VIM-203ENST00000469543 JOSD1Q15040 202 aaPredicted RBP15.3■□□□□ 0.04
VIM-203ENST00000469543 VMA21Q3ZAQ7 101 aa15.3■□□□□ 0.04
VIM-203ENST00000469543 C10orf113Q5VZT2 155 aa15.3■□□□□ 0.04
VIM-203ENST00000469543 LINC00305Q7Z4B0 112 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms