RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ID3Q02535 119 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 PCNX1Q96RV3 2341 aa12.5□□□□□ -0.41
LIMS2-213ENST00000469300 IGKV1-27A0A075B6S5 117 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 IGHV2-26A0A0B4J1V2 119 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 RRHO14718 337 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 TMEM190Q8WZ59 177 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 RARRES2Q99969 163 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 TRAV40A0A0B4J280 105 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 CGB1A6NKQ9 187 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 ZNF525Q8N782 197 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 LINC00614P0C842 121 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-213ENST00000469300 LHFPL1Q86WI0 220 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 MOB4Q9Y3A3 225 aa12.49□□□□□ -0.41
LIMS2-213ENST00000469300 NUP210Q8TEM1 1887 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-213ENST00000469300 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 PSPNO60542 156 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 DLX1P56177 255 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 ICAM4Q14773 271 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 PROK2Q9HC23 129 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 CKS2P33552 79 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 TMEM200BQ69YZ2 307 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 LAMTOR2Q9Y2Q5 125 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 CLEC19AQ6UXS0 136 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 ZNF407Q9C0G0 2248 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 A0A087WWC5 75 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 OR4C46A6NHA9 309 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 TMEM136Q6ZRR5 245 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 Q6ZS49 121 aa12.48□□□□□ -0.41
LIMS2-213ENST00000469300 DLEU1O43261 78 aa12.47□□□□□ -0.41
LIMS2-213ENST00000469300 NDUFS6O75380 124 aaKnown RBP12.47□□□□□ -0.41
LIMS2-213ENST00000469300 JOSD1Q15040 202 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-213ENST00000469300 ASCL4Q6XD76 172 aa12.47□□□□□ -0.41
LIMS2-213ENST00000469300 CD177Q8N6Q3 437 aa12.47□□□□□ -0.41
LIMS2-213ENST00000469300 CD69Q07108 199 aa12.47□□□□□ -0.41
LIMS2-213ENST00000469300 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
LIMS2-213ENST00000469300 SLC50A1Q9BRV3 221 aa12.47□□□□□ -0.41
LIMS2-213ENST00000469300 TMEM70Q9BUB7 260 aa12.47□□□□□ -0.41
LIMS2-213ENST00000469300 TBL2Q9Y4P3 447 aaKnown RBP12.47□□□□□ -0.41
LIMS2-213ENST00000469300 ZFHX2Q9C0A1 2572 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-213ENST00000469300 FAM53AQ6NSI3 398 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-213ENST00000469300 VOPP1Q96AW1 172 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 SFRP2Q96HF1 295 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 CRIM1Q9NZV1 1036 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 DERL1Q9BUN8 251 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 IGHV3OR16-12A0A075B7B8 117 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 HGFACQ04756 655 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 TCF15Q12870 199 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 FHL1Q13642 323 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 TPTE2P1Q5T6R2 138 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 FAM71F2Q6NXP2 309 aa12.46□□□□□ -0.41
LIMS2-213ENST00000469300 GRIFINA4D1Z8 144 aa12.46□□□□□ -0.42
LIMS2-213ENST00000469300 AMY1AP04745 511 aa12.46□□□□□ -0.42
LIMS2-213ENST00000469300 COX6CP09669 75 aa12.46□□□□□ -0.42
LIMS2-213ENST00000469300 GATA3P23771 443 aa12.46□□□□□ -0.42
LIMS2-213ENST00000469300 SRIP30626 198 aa12.46□□□□□ -0.42
LIMS2-213ENST00000469300 SOX21Q9Y651 276 aaPredicted RBP12.46□□□□□ -0.42
LIMS2-213ENST00000469300 IGKV1D-8A0A087WSZ0 117 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 E7EQL1 145 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 NUDT3O95989 172 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 RHOGP84095 191 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 VMO1Q7Z5L0 202 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 MLNRO43193 412 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 SLC25A48Q6ZT89 311 aaKnown RBP12.45□□□□□ -0.42
LIMS2-213ENST00000469300 ATOH7Q8N100 152 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 GAFA1Q96PS6 74 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 WNK2Q9Y3S1 2297 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 SLC17A3O00476 420 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 EMP1P54849 157 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 KIAA2026Q5HYC2 2103 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 Q6P435 159 aa12.45□□□□□ -0.42
LIMS2-213ENST00000469300 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-213ENST00000469300 TDGF1P13385 188 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 SELLP14151 372 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 LDLRAD2Q5SZI1 272 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 AMMECR1LQ6DCA0 310 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 MAP1LC3AQ9H492 121 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 PLXNA2O75051 1894 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 IGHV3OR16-13A0A075B7E8 117 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 IGHV3-74A0A0B4J1X5 117 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 ITGB1BP1O14713 200 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 AREGP15514 252 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 TFF3Q07654 80 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 FBLN7Q53RD9 439 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 KIAA1671Q9BY89 1806 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 H3BTX0 84 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 TFF1P04155 84 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 PLAURQ03405 335 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 PRSS8Q16651 343 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 CENPWQ5EE01 88 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 C2orf88Q9BSF0 95 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 MED13LQ71F56 2210 aa12.44□□□□□ -0.42
LIMS2-213ENST00000469300 RAMP3O60896 148 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms