RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RARRES2Q99969 163 aa7.44□□□□□ -1.22
SMC1A-205ENST00000469129 RASL11BQ9BPW5 248 aa7.44□□□□□ -1.22
SMC1A-205ENST00000469129 FUT9Q9Y231 359 aa7.44□□□□□ -1.22
SMC1A-205ENST00000469129 ARL2-SNX15V9GYD0 113 aa7.44□□□□□ -1.22
SMC1A-205ENST00000469129 PLXNB1O43157 2135 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 NOTCH2Q04721 2471 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 CELSR2Q9HCU4 2923 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 CENPEQ02224 2701 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 C9JQL5 133 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 J3QLI3 93 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 OR5G3P0C626 314 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 ARL14EPLP0DKL9 152 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 CTRB1P17538 263 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 SSBP2P81877 361 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-205ENST00000469129 FAM74A3Q4VXF1 159 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 CTRB2Q6GPI1 263 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 PQLC2Q6ZP29 291 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 CYB561D1Q8N8Q1 229 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 LINC01356Q8N9X3 169 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 GATAD1Q8WUU5 269 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 TRGV9Q99603 122 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 NIPSNAP3BQ9BS92 247 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-205ENST00000469129 TMEM167BQ9NRX6 74 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 THYN1Q9P016 225 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 CR1P17927 2039 aa7.43□□□□□ -1.22
SMC1A-205ENST00000469129 ANKRD17O75179 2603 aaKnown RBP7.42□□□□□ -1.22
SMC1A-205ENST00000469129 IGKV1OR2-108A0A075B7D4 117 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 F6UZH7 168 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 M0R036 132 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 FCN1O00602 326 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 PDE6DO43924 150 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 COX7A2P2O60397 106 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 LINC00869P0C866 280 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 HIST1H1BP16401 226 aaKnown RBP7.42□□□□□ -1.22
SMC1A-205ENST00000469129 CD24P25063 80 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 CEBPGP53567 150 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 LOXL1Q08397 574 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-205ENST00000469129 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-205ENST00000469129 BTN1A1Q13410 526 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 DEFB113Q30KQ7 82 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 AWAT1Q58HT5 328 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 GCSAMLQ5JQS6 135 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 FAM78BQ5VT40 261 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 SPNS3Q6ZMD2 512 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 TMEM116Q8NCL8 245 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 OR2T6Q8NHC8 308 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 C17orf50Q8WW18 174 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 NPIPB3Q92617 1050 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 TMEM68Q96MH6 324 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 WNT10AQ9GZT5 417 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 C7orf69Q9H7B7 122 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 TECRQ9NZ01 308 aaKnown RBP7.42□□□□□ -1.22
SMC1A-205ENST00000469129 MOB4Q9Y3A3 225 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 AKAP6Q13023 2319 aa7.42□□□□□ -1.22
SMC1A-205ENST00000469129 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMC1A-205ENST00000469129 DCHS2Q6V1P9 2916 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-205ENST00000469129 HMGB3O15347 200 aaKnown RBP7.41□□□□□ -1.22
SMC1A-205ENST00000469129 CLN5O75503 358 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 GCHFRP30047 84 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 NPBWR1P48145 328 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 MFAP2P55001 183 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 CX3CL1P78423 397 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 C10orf113Q5VZT2 155 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 ATRAIDQ6UW56 229 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 PIP4P2Q8N4L2 257 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 TTC9CQ8N5M4 171 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-205ENST00000469129 Q8N9W7 124 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 OR4X1Q8NH49 305 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 NRGNQ92686 78 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 MBD6Q96DN6 1003 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 TVP23CQ96ET8 276 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 ZNF48Q96MX3 618 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-205ENST00000469129 SLC25A33Q9BSK2 321 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 MEGF9Q9H1U4 602 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 HIF1ANQ9NWT6 349 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 PITPNC1Q9UKF7 332 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 ITPR2Q14571 2701 aa7.41□□□□□ -1.22
SMC1A-205ENST00000469129 IGKV1D-37A0A075B6S9 117 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 TRAV30A0A087WSZ9 112 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 A0A096LNT2 108 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 B4DEV8 164 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 C11orf94C9JXX5 98 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 I3L2K1 104 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 DNASE2O00115 360 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-205ENST00000469129 PAGE4O60829 102 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 C8orf88P0DMB2 117 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 APELAP0DMC3 54 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 Q5PR19 223 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 FAM90A2PQ658T7 463 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 RUSC1-AS1Q66K80 236 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 C16orf82Q7Z2V1 217 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 S100A7AQ86SG5 101 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 OR4F5Q8NH21 305 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 SGMS2Q8NHU3 365 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms