RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 S100A11P31949 105 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 NPBWR1P48145 328 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 AP2S1P53680 142 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-216ENST00000468949 EWSR1Q01844 656 aaKnown RBP eCLIP6.34□□□□□ -1.39
HDAC6-216ENST00000468949 BSXQ3C1V8 233 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 C19orf54Q5BKX5 351 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 ACOT7LQ6ZUV0 252 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 TMEM252Q8N6L7 170 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 ACY3Q96HD9 319 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 ST6GAL2Q96JF0 529 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 GNB4Q9HAV0 340 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
HDAC6-216ENST00000468949 TSSC4Q9Y5U2 329 aaPredicted RBP6.34□□□□□ -1.39
HDAC6-216ENST00000468949 TRBV9A0A0B4J1U6 114 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 UBE2L5PA0A1B0GUS4 154 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 A0A1W2PRX2 142 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 IGSF23A1L1A6 192 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 H0YIZ8 118 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 NUPL2O15504 423 aaKnown RBP6.33□□□□□ -1.4
HDAC6-216ENST00000468949 DFFBO76075 338 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 NDUFB8O95169 186 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 BRI3O95415 125 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 TMEM50AO95807 157 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 IFNA5P01569 189 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 IGHV3-11P01762 117 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 IGHV3-23P01764 117 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 C1QBP02746 253 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 FABP1P07148 127 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 LYL1P12980 280 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 C4BPBP20851 252 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 MFAP4P55083 255 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 PAX9P55771 341 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 PROK1P58294 105 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 DLK1P80370 383 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 CD69Q07108 199 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 CLINT1Q14677 625 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 ATP6V1FQ16864 119 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 C10orf99Q6UWK7 81 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 TREML4Q6UXN2 200 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 TMEM14EPQ6UXP3 125 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 LCNL1Q6ZST4 164 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 C8orf86Q6ZUL3 223 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 KLHL30-AS1Q8NEE0 82 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 VN1R17PQ8TDU5 208 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 CACNG8Q8WXS5 425 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 HYLS1Q96M11 299 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 OR5B12Q96R08 314 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 ARPC5LQ9BPX5 153 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 TMEM147Q9BVK8 224 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 MFFQ9GZY8 342 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 UQCC1Q9NVA1 299 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 HSPB11Q9Y547 144 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 S4R3C0 116 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 FBN3Q75N90 2809 aa6.33□□□□□ -1.4
HDAC6-216ENST00000468949 BORCS7-ASMTA0A0B4J1R7 106 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 KANTRA0A1W2PQU2 76 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 ANKRD34BA5PLL1 514 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 MFSD2BA6NFX1 497 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 ZFP92A6NM28 416 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 K7EIM0 57 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 IGHV3-48P01763 117 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 LGALS1P09382 135 aaKnown RBP6.32□□□□□ -1.4
HDAC6-216ENST00000468949 CD28P10747 220 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 GPR183P32249 361 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 GPX4P36969 197 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-216ENST00000468949 RND2P52198 227 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 MFAP2P55001 183 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 OR2F1Q13607 317 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 RAB31Q13636 194 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF266Q14584 549 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 NSUN5P1Q3KNT7 163 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 Q5BKY6 102 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 RNF152Q8N8N0 203 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 OR5C1Q8NGR4 320 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 SCGB1C1Q8TD33 95 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 C4orf3Q8WVX3 66 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 DPF1Q92782 380 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 UBE2E2Q96LR5 201 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 AQP10Q96PS8 301 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 TXN2Q99757 166 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 ATP5SQ99766 215 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 RNF126Q9BV68 326 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 GGACTQ9BVM4 153 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 SMIM3Q9BZL3 60 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 KLK15Q9H2R5 256 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 C11orf1Q9H5F2 150 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 TNFSF18Q9UNG2 199 aa6.32□□□□□ -1.4
HDAC6-216ENST00000468949 TRAV30A0A087WSZ9 112 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 A0A0D9SG52 128 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 OR2T8A6NH00 312 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 HMSDA8MTL9 139 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 FNDC10F2Z333 226 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 I3L2K1 104 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 PF4P02776 101 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 HNRNPCP07910 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
HDAC6-216ENST00000468949 OR10J1P30954 320 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 ARL3P36405 182 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 EIF2B2P49770 351 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms