RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 MS4A18H0YCH9 400 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 ZIC3O60481 467 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 FCN3O75636 299 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 APOMO95445 188 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 GABRG2P18507 467 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 GATA2P23769 480 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-207ENST00000468925 CD27P26842 260 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 ATP5G3P48201 142 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 GNG3P63215 75 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 ARL16Q0P5N6 197 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 TCF15Q12870 199 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 FAM53BQ14153 422 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 MLF2Q15773 248 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-207ENST00000468925 MS4A18Q3C1V0 323 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 TMEM196Q5HYL7 178 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 TTC32Q5I0X7 151 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 SLC35E4Q6ICL7 350 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-207ENST00000468925 Q6ZUT4 128 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 FOXL2NBQ6ZUU3 175 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 OOSP2Q86WS3 158 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 RPRMLQ8N4K4 120 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF611Q8N823 705 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 OR51H1Q8NH63 302 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 C16orf52Q8NHV5 167 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 LRRC29Q8WV35 223 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 PPDPFLQ8WWR9 84 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 NRGNQ92686 78 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 DNAJA3Q96EY1 480 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 SPAG8Q99932 426 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-207ENST00000468925 VKORC1Q9BQB6 163 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 FAM60AQ9NP50 221 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 PRTFDC1Q9NRG1 225 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 TECRQ9NZ01 308 aaKnown RBP3.99□□□□□ -1.77
SF3B1-207ENST00000468925 CLCF1Q9UBD9 225 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 IL36RNQ9UBH0 155 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 PEMTQ9UBM1 199 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 SS18L2Q9UHA2 77 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 POLDIP2Q9Y2S7 368 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 LINC00312Q9Y6C7 94 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 R4GN57 208 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 RALGAPA1Q6GYQ0 2036 aa3.99□□□□□ -1.77
SF3B1-207ENST00000468925 FREM3P0C091 2139 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 SPTBP11277 2137 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 EYSQ5T1H1 3165 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 SCN10AQ9Y5Y9 1956 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 PRUNE2Q8WUY3 3088 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 TRBV20-1A0A075B6N2 111 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 A0A1B0GXF2 115 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 PMS2P5A8MQ11 134 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 VWC2LB2RUY7 222 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 H3BP45 60 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-207ENST00000468925 K7EN84 100 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 RHODO00212 210 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 TNFRSF13BO14836 293 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-207ENST00000468925 WISP2O76076 250 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 ARL14EPLP0DKL9 152 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 FGF6P10767 208 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 IAPPP10997 89 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 IFITM1P13164 125 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 PVRP15151 417 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 CD38P28907 300 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 OTX2P32243 289 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 MPV17P39210 176 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 MFAP2P55001 183 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 RPS28P62857 69 aaKnown RBP3.98□□□□□ -1.77
SF3B1-207ENST00000468925 RPL30P62888 115 aaKnown RBP3.98□□□□□ -1.77
SF3B1-207ENST00000468925 SRYQ05066 204 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 MEF2CQ06413 473 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-207ENST00000468925 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 GAGE2EQ4V326 116 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 CENPWQ5EE01 88 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 C10orf128Q5T292 105 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 Q6AWC8 147 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 H2BFWTQ7Z2G1 175 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 C1QL2Q7Z5L3 287 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 MKXQ8IYA7 352 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 LRRC75A-AS1Q8N1F1 130 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF114Q8NC26 417 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 NUP35Q8NFH5 326 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 CT55Q8WUE5 264 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 GLMPQ8WWB7 406 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 NAT6Q93015 286 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 PIGTQ969N2 578 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF501Q96CX3 271 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-207ENST00000468925 RNF183Q96D59 192 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 COQ2Q96H96 371 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 SPACA5Q96QH8 159 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 NRTNQ99748 197 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 CITED1Q99966 193 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 HDHD3Q9BSH5 251 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-207ENST00000468925 IFI27L2Q9H2X8 130 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 CCL28Q9NRJ3 127 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 SERTAD4Q9NUC0 356 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 IDI2-AS1Q9NZ38 188 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 TMEM131Q92545 1883 aa3.98□□□□□ -1.77
SF3B1-207ENST00000468925 THADAQ6YHU6 1953 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms