RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 KLF9Q13886 244 aaPredicted RBP10.98□□□□□ -0.65
COMMD3-206ENST00000468179 TMEM187Q14656 261 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 PVRIGQ6DKI7 326 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 Q6ZRM9 215 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 CCDC190Q86UF4 302 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 LGI3Q8N145 548 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 LHFPL5Q8TAF8 219 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 GPR146Q96CH1 333 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 HIPK2Q9H2X6 1198 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 SRD5A3Q9H8P0 318 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 HEYLQ9NQ87 328 aaPredicted RBP10.98□□□□□ -0.65
COMMD3-206ENST00000468179 NDUFA13Q9P0J0 144 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 V9GYH0 126 aa10.98□□□□□ -0.65
COMMD3-206ENST00000468179 A0A0B4J2A0 478 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 CEBPZOSA8MTT3 80 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 TSPAN4O14817 238 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 CD5P06127 495 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 RNASE2P10153 161 aaKnown RBP10.97□□□□□ -0.65
COMMD3-206ENST00000468179 OPRK1P41145 380 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 CCR6P51684 374 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 DEFB125Q8N687 156 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 TRIM63Q969Q1 353 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 TMEM230Q96A57 120 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 OR10C1Q96KK4 312 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 SHPKQ9UHJ6 478 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 SMPXQ9UHP9 88 aa10.97□□□□□ -0.65
COMMD3-206ENST00000468179 TRAV30A0A087WSZ9 112 aa10.96□□□□□ -0.65
COMMD3-206ENST00000468179 TRAV14DV4A0A0A6YYC5 116 aa10.96□□□□□ -0.65
COMMD3-206ENST00000468179 OR4C46A6NHA9 309 aa10.96□□□□□ -0.65
COMMD3-206ENST00000468179 CMC4P56277 68 aaPredicted RBP10.96□□□□□ -0.65
COMMD3-206ENST00000468179 TMEM128Q5BJH2 165 aa10.96□□□□□ -0.65
COMMD3-206ENST00000468179 LINC00322Q6ZN03 302 aaPredicted RBP10.96□□□□□ -0.65
COMMD3-206ENST00000468179 ZNF600Q6ZNG1 722 aa10.96□□□□□ -0.65
COMMD3-206ENST00000468179 TMEM116Q8NCL8 245 aa10.96□□□□□ -0.65
COMMD3-206ENST00000468179 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 TMEM50AO95807 157 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 IGHV3-48P01763 117 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 SMCO1Q147U7 214 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 ZNF79Q15937 498 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 BSXQ3C1V8 233 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 C2orf83Q53S99 150 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 ETFRF1Q6IPR1 90 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 TMED4Q7Z7H5 227 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 OR4X1Q8NH49 305 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 RNASEH2CQ8TDP1 164 aaKnown RBP10.95□□□□□ -0.66
COMMD3-206ENST00000468179 CITED4Q96RK1 184 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 RHPN1-AS1Q9BWJ2 59 aa10.95□□□□□ -0.66
COMMD3-206ENST00000468179 A0A1B0GU03 582 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 NAP1L6A6NFF2 107 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 ZNF207O43670 478 aaKnown RBP10.94□□□□□ -0.66
COMMD3-206ENST00000468179 CLN5O75503 358 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 SLC25A4P12235 298 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 PAFAH1B2P68402 229 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 TRIQKQ629K1 86 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 SLC24A4Q8NFF2 622 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 FAM110AQ9BQ89 295 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 TMEM231Q9H6L2 316 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 SELENOKQ9Y6D0 94 aa10.94□□□□□ -0.66
COMMD3-206ENST00000468179 IGHV3OR16-8A0A075B7F1 116 aa10.93□□□□□ -0.66
COMMD3-206ENST00000468179 LOC102724200A0A096LPH7 203 aaPredicted RBP10.93□□□□□ -0.66
COMMD3-206ENST00000468179 CHEK1O14757 476 aa10.93□□□□□ -0.66
COMMD3-206ENST00000468179 ATP5IP56385 69 aaPredicted RBP10.93□□□□□ -0.66
COMMD3-206ENST00000468179 SUPT4H1P63272 117 aaKnown RBP10.93□□□□□ -0.66
COMMD3-206ENST00000468179 RBMS2Q15434 407 aaKnown RBP10.93□□□□□ -0.66
COMMD3-206ENST00000468179 NMSQ5H8A3 153 aa10.93□□□□□ -0.66
COMMD3-206ENST00000468179 NARS2Q96I59 477 aaKnown RBP10.93□□□□□ -0.66
COMMD3-206ENST00000468179 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
COMMD3-206ENST00000468179 U3KQ87 197 aa10.93□□□□□ -0.66
COMMD3-206ENST00000468179 A0A1W2PS18 150 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
COMMD3-206ENST00000468179 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
COMMD3-206ENST00000468179 CENPXA8MT69 81 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 IFNA10P01566 189 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
COMMD3-206ENST00000468179 VAMP1P23763 118 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 NPY1RP25929 384 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 TNFRSF9Q07011 255 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 LYZL2Q7Z4W2 148 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 CENPSQ8N2Z9 138 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 OR1S1Q8NH92 325 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 SRRQ9GZT4 340 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 WFDC10AQ9H1F0 79 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 HSPB7Q9UBY9 170 aa10.92□□□□□ -0.66
COMMD3-206ENST00000468179 PUS1Q9Y606 427 aaKnown RBP eCLIP10.92□□□□□ -0.66
COMMD3-206ENST00000468179 SLC25A6P12236 298 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 LYL1P12980 280 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 NPPCP23582 126 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 UBE2MP61081 183 aaKnown RBP10.91□□□□□ -0.66
COMMD3-206ENST00000468179 LRTM2Q8N967 370 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 OR1S2Q8NGQ3 325 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 DTD1Q8TEA8 209 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 RNF2Q99496 336 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
COMMD3-206ENST00000468179 PRR13Q9NZ81 148 aa10.91□□□□□ -0.66
COMMD3-206ENST00000468179 MED6O75586 246 aa10.9□□□□□ -0.66
COMMD3-206ENST00000468179 SFT2D2O95562 160 aa10.9□□□□□ -0.66
COMMD3-206ENST00000468179 APOC4P55056 127 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms