RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 TAX1BP3O14907 124 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 TOX4O94842 621 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 FSTL3O95633 263 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 IGFBP4P22692 258 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 RNASEKQ6P5S7 137 aaKnown RBP12.64□□□□□ -0.39
CHD1L-205ENST00000467213 OR4A5Q8NH83 315 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 OSR1Q8TAX0 266 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-205ENST00000467213 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 C9orf172C9J069 976 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 CD5LO43866 347 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 LYZL6O75951 148 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 ZNF883P0CG24 379 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 SP9P0CG40 484 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 SLC25A34Q6PIV7 304 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 ATOH7Q8N100 152 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 FER1L6-AS2Q96M78 137 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 PAXXQ9BUH6 204 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 A8MWL6 223 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 IGHG3P01860 377 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 CECR9P0C854 216 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 RPL8P62917 257 aaKnown RBP12.64□□□□□ -0.39
CHD1L-205ENST00000467213 SMIM15Q7Z3B0 74 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 TDHQ8IZJ6 230 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 LOXL4Q96JB6 756 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 NDUFA4L2Q9NRX3 87 aa12.64□□□□□ -0.39
CHD1L-205ENST00000467213 TANC2Q9HCD6 1990 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 SRRM4A7MD48 611 aaKnown RBP12.63□□□□□ -0.39
CHD1L-205ENST00000467213 LIPFP07098 398 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 LINC00696Q6ZRV3 163 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 SLC25A48Q6ZT89 311 aaKnown RBP12.63□□□□□ -0.39
CHD1L-205ENST00000467213 DPF1Q92782 380 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 FXYD5Q96DB9 178 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 CA1P00915 261 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-205ENST00000467213 GATA4P43694 442 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 SPATA12Q7Z6I5 190 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 OR9G1Q8NH87 305 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 GPR82Q96P67 336 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 SCRT2Q9NQ03 307 aa12.63□□□□□ -0.39
CHD1L-205ENST00000467213 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
CHD1L-205ENST00000467213 ERHP84090 104 aaKnown RBP12.62□□□□□ -0.39
CHD1L-205ENST00000467213 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 SSBP3Q9BWW4 388 aaPredicted RBP12.62□□□□□ -0.39
CHD1L-205ENST00000467213 RPP21Q9H633 154 aaKnown RBP12.62□□□□□ -0.39
CHD1L-205ENST00000467213 ZNF430Q9H8G1 570 aaPredicted RBP12.62□□□□□ -0.39
CHD1L-205ENST00000467213 DNAJC13O75165 2243 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 C19orf71A6NCJ1 209 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 C22orf46C9J442 243 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 VAMP3Q15836 100 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 C3orf36Q3SXR2 165 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 GATD1Q8NB37 220 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 TMEM178AQ8NBL3 297 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 DEFB127Q9H1M4 99 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 EPDR1Q9UM22 224 aa12.62□□□□□ -0.39
CHD1L-205ENST00000467213 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 IGHV1-24A0A0C4DH33 117 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 COX7A2P2O60397 106 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 HOXA4Q00056 320 aaPredicted RBP12.61□□□□□ -0.39
CHD1L-205ENST00000467213 HIST1H1AQ02539 215 aaPredicted RBP12.61□□□□□ -0.39
CHD1L-205ENST00000467213 SSX8Q7RTT4 187 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 UBALD2Q8IYN6 164 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 FMC1Q96HJ9 113 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 DOCK7Q96N67 2140 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
CHD1L-205ENST00000467213 TRBV6-1A0A0K0K1D8 114 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 VWC2LB2RUY7 222 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 LEPROTL1O95214 131 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 IGHV3-13P01766 116 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 FABP6P51161 128 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 FAM71F2Q6NXP2 309 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 ZNF833PQ6ZTB9 187 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 MOB3BQ86TA1 216 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 CST9LQ9H4G1 147 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 GATA2P23769 480 aaPredicted RBP12.6□□□□□ -0.39
CHD1L-205ENST00000467213 TMEM177Q53S58 311 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 MPV17L2Q567V2 206 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 OCIAD2Q56VL3 154 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 RNFT1Q5M7Z0 435 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 OR2Z1Q8NG97 314 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 PLSCR4Q9NRQ2 329 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 HSPB8Q9UJY1 196 aa12.6□□□□□ -0.39
CHD1L-205ENST00000467213 M0R296 226 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 FOXA3P55318 350 aaPredicted RBP12.59□□□□□ -0.39
CHD1L-205ENST00000467213 PAX2Q02962 417 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 PATE2Q6UY27 113 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 HINT2Q9BX68 163 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 RPUSD1Q9UJJ7 312 aaKnown RBP12.59□□□□□ -0.39
CHD1L-205ENST00000467213 IGHV1-18A0A0C4DH31 117 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 LTAP01374 205 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.396e-11■■■■■ 33.7
CHD1L-205ENST00000467213 TMEM164Q5U3C3 297 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 C16orf54Q6UWD8 224 aa12.59□□□□□ -0.39
CHD1L-205ENST00000467213 RBPMS2Q6ZRY4 209 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms