RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 TRAV14DV4A0A0A6YYC5 116 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-205ENST00000466897 M0QZ24 198 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 HSPB1P04792 205 aaKnown RBP11.72□□□□□ -0.53
NPHP4-205ENST00000466897 NPBWR1P48145 328 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 CAV2P51636 162 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 NSUN5P1Q3KNT7 163 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 SPSB3Q6PJ21 355 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 SLC16A13Q7RTY0 426 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 OR2T35Q8NGX2 323 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-205ENST00000466897 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
NPHP4-205ENST00000466897 A0A1W2PRX2 142 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 METTL15P1P0C7V9 234 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 MYCNOSP40205 109 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 SULT1A1P50225 295 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 BCAP31P51572 246 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 BAXQ07812 192 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 HIST2H2BDQ6DRA6 164 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 STX12Q86Y82 276 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 OR10P1Q8NGE3 313 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 SLC25A31Q9H0C2 315 aa11.71□□□□□ -0.53
NPHP4-205ENST00000466897 PAIP2BQ9ULR5 123 aaKnown RBP11.71□□□□□ -0.53
NPHP4-205ENST00000466897 IGSF23A1L1A6 192 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 FAM24AA6NFZ4 105 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 G3V3Q6 166 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 CCL24O00175 119 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 CLN5O75503 358 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 SCGB2A1O75556 95 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 ZP3P21754 424 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 DLK1P80370 383 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 ZNF616Q08AN1 781 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 ACSM6Q6P461 480 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 CLEC19AQ6UXS0 136 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 OR11H1Q8NG94 326 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 DCUN1D4Q92564 292 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 OR5B12Q96R08 314 aa11.7□□□□□ -0.54
NPHP4-205ENST00000466897 ANK2Q01484 3957 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 IGHV4OR15-8A0A075B7B6 117 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 TRAV30A0A087WSZ9 112 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 A0A087WW49 117 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 IGHV3-21A0A0B4J1V1 117 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 LINC01619G3V211 115 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 BMPR1BO00238 502 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 TGOLN2O43493 480 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 GNG7O60262 68 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
NPHP4-205ENST00000466897 IGHV3-23P01764 117 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 CLEC3BP05452 202 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 GPR183P32249 361 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 ARL3P36405 182 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 HBG1P69891 147 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 HBG2P69892 147 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 GAMTQ14353 236 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 DEFB136Q30KP8 78 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 Q56UQ5 140 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 HAPLN4Q86UW8 402 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 TCTE3Q8IZS6 198 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
NPHP4-205ENST00000466897 S4R3C0 116 aa11.69□□□□□ -0.54
NPHP4-205ENST00000466897 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 A0A1B0GVG6 124 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 ANKRD34BA5PLL1 514 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 OR2T8A6NH00 312 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 NUPL2O15504 423 aaKnown RBP11.68□□□□□ -0.54
NPHP4-205ENST00000466897 CCNKO75909 580 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 TRBV12-3P01733 135 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 CTSGP08311 255 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 S100A11P31949 105 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 RND2P52198 227 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 EWSR1Q01844 656 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPHP4-205ENST00000466897 MLANAQ16655 118 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 Q5BKY6 102 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 OR8G2PQ6IF36 304 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 ACOT7LQ6ZUV0 252 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 DPF1Q92782 380 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 ST6GAL2Q96JF0 529 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 AQP10Q96PS8 301 aa11.68□□□□□ -0.54
NPHP4-205ENST00000466897 CST7O76096 145 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 IGHV3-48P01763 117 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 RPL12P30050 165 aaKnown RBP11.67□□□□□ -0.54
NPHP4-205ENST00000466897 HOXD3P31249 432 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-205ENST00000466897 ADMP35318 185 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 RELQ04864 619 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-205ENST00000466897 SLC38A11Q08AI6 406 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 ATP6V1FQ16864 119 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 VWC2Q2TAL6 325 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 GPHB5Q86YW7 130 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 THAP8Q8NA92 274 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 UBAC2Q8NBM4 344 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 OR1S2Q8NGQ3 325 aa11.67□□□□□ -0.54
NPHP4-205ENST00000466897 NPIPB3Q92617 1050 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms