RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LEMD1Q68G75 181 aa14.04□□□□□ -0.16
COL9A3-206ENST00000466532 OR13C8Q8NGS7 320 aa14.04□□□□□ -0.16
COL9A3-206ENST00000466532 TERB2Q8NHR7 220 aa14.04□□□□□ -0.16
COL9A3-206ENST00000466532 RNASE11Q8TAA1 199 aaKnown RBP14.04□□□□□ -0.16
COL9A3-206ENST00000466532 RRNAD1Q96FB5 475 aaKnown RBP14.04□□□□□ -0.16
COL9A3-206ENST00000466532 ABHD1Q96SE0 405 aa14.04□□□□□ -0.16
COL9A3-206ENST00000466532 MRPL36Q9P0J6 103 aaKnown RBP14.04□□□□□ -0.16
COL9A3-206ENST00000466532 TRAV2A0A0B4J234 112 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 A0A0G2JRQ6 117 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 CLN5O75503 358 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 GABARAPO95166 117 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 UCP1P25874 307 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 OPRK1P41145 380 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 TAS2R19P59542 299 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 CTF1Q16619 201 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 FAM24BQ8N5W8 94 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 TMEM229BQ8NBD8 167 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 C11orf45Q8TAV5 145 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 MARCH1Q8TCQ1 289 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 C15orf40Q8WUR7 153 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 C11orf68Q9H3H3 251 aaKnown RBP14.03□□□□□ -0.16
COL9A3-206ENST00000466532 FNDC4Q9H6D8 234 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-206ENST00000466532 RABAC1Q9UI14 185 aa14.03□□□□□ -0.16
COL9A3-206ENST00000466532 A0A1W2PS18 150 aa14.02□□□□□ -0.17
COL9A3-206ENST00000466532 RAB3DO95716 219 aa14.02□□□□□ -0.17
COL9A3-206ENST00000466532 CD74P04233 296 aa14.02□□□□□ -0.17
COL9A3-206ENST00000466532 NPPCP23582 126 aa14.02□□□□□ -0.17
COL9A3-206ENST00000466532 NANOS2P60321 138 aaKnown RBP14.02□□□□□ -0.17
COL9A3-206ENST00000466532 TMEM187Q14656 261 aa14.02□□□□□ -0.17
COL9A3-206ENST00000466532 MFFQ9GZY8 342 aa14.02□□□□□ -0.17
COL9A3-206ENST00000466532 SCGB2A1O75556 95 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 B3GALNT1O75752 331 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 MLANAQ16655 118 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 STEAP1BQ6NZ63 245 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 OR4X1Q8NH49 305 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 TMEM230Q96A57 120 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 METTL26Q96S19 204 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 FBXL17Q9UF56 701 aa14.01□□□□□ -0.17
COL9A3-206ENST00000466532 DEFB4AO15263 64 aa14□□□□□ -0.17
COL9A3-206ENST00000466532 RPL5P46777 297 aaKnown RBP14□□□□□ -0.17
COL9A3-206ENST00000466532 RBMS2Q15434 407 aaKnown RBP14□□□□□ -0.17
COL9A3-206ENST00000466532 BSXQ3C1V8 233 aa14□□□□□ -0.17
COL9A3-206ENST00000466532 GPR107Q5VW38 600 aa14□□□□□ -0.17
COL9A3-206ENST00000466532 Q6ZRM9 215 aa14□□□□□ -0.17
COL9A3-206ENST00000466532 STHQ8IWL8 128 aa14□□□□□ -0.17
COL9A3-206ENST00000466532 RPP25LQ8N5L8 163 aaKnown RBP14□□□□□ -0.17
COL9A3-206ENST00000466532 STXBP6Q8NFX7 210 aa14□□□□□ -0.17
COL9A3-206ENST00000466532 TMEM222Q9H0R3 208 aa14□□□□□ -0.17
COL9A3-206ENST00000466532 GABARAPH6UMI1 98 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 IFNA4P05014 189 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 OR5AC1P0C628 307 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 SMIM18P0DKX4 95 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 CRYBB3P26998 211 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 P2RY1P47900 373 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 SPCS3P61009 180 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 TIGITQ495A1 244 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 LGALS9CQ6DKI2 356 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 FAAP20Q6NZ36 180 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 FAM219AQ8IW50 185 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 MIXL1Q9H2W2 232 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 C14orf166Q9Y224 244 aaKnown RBP13.99□□□□□ -0.17
COL9A3-206ENST00000466532 DNAH10Q8IVF4 4471 aa13.99□□□□□ -0.17
COL9A3-206ENST00000466532 TRAV30A0A087WSZ9 112 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 K7EQG2 157 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 RGS5O15539 181 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 DEDDO75618 318 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 CDS2O95674 445 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 HTR2BP41595 481 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 MEF2DQ14814 521 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 OR52E5Q8NH55 327 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 LHFPL5Q8TAF8 219 aa13.98□□□□□ -0.17
COL9A3-206ENST00000466532 NARS2Q96I59 477 aaKnown RBP13.98□□□□□ -0.17
COL9A3-206ENST00000466532 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-206ENST00000466532 TEX13DA0A0J9YY54 714 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-206ENST00000466532 RPS10-NUDT3A0A1W2PQS6 291 aa13.97□□□□□ -0.17
COL9A3-206ENST00000466532 IGKV1-17P01599 117 aa13.97□□□□□ -0.17
COL9A3-206ENST00000466532 SSBP1Q04837 148 aaKnown RBP13.97□□□□□ -0.17
COL9A3-206ENST00000466532 AARDQ4LEZ3 155 aa13.97□□□□□ -0.17
COL9A3-206ENST00000466532 GLYATL2Q8WU03 294 aa13.97□□□□□ -0.17
COL9A3-206ENST00000466532 RBPMSQ93062 196 aaKnown RBP13.97□□□□□ -0.17
COL9A3-206ENST00000466532 GRAMD2BQ96HH9 432 aa13.97□□□□□ -0.17
COL9A3-206ENST00000466532 RTBDNQ9BSG5 229 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-206ENST00000466532 NAA60Q9H7X0 242 aa13.97□□□□□ -0.17
COL9A3-206ENST00000466532 HEYLQ9NQ87 328 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-206ENST00000466532 CACNG5Q9UF02 275 aa13.97□□□□□ -0.17
COL9A3-206ENST00000466532 DISC1C4P0D8 188 aa13.96□□□□□ -0.17
COL9A3-206ENST00000466532 ZNF688P0C7X2 276 aa13.96□□□□□ -0.17
COL9A3-206ENST00000466532 MRPS10P82664 201 aaKnown RBP13.96□□□□□ -0.17
COL9A3-206ENST00000466532 TRPT1Q86TN4 253 aaKnown RBP13.96□□□□□ -0.17
COL9A3-206ENST00000466532 SELENOHQ8IZQ5 122 aaKnown RBP13.96□□□□□ -0.17
COL9A3-206ENST00000466532 VPS13DQ5THJ4 4388 aa13.96□□□□□ -0.17
COL9A3-206ENST00000466532 DHODHQ02127 395 aa13.95□□□□□ -0.18
COL9A3-206ENST00000466532 SURF2Q15527 256 aaPredicted RBP13.95□□□□□ -0.18
COL9A3-206ENST00000466532 TMEM268Q5VZI3 342 aa13.95□□□□□ -0.18
COL9A3-206ENST00000466532 PRSS54Q6PEW0 395 aa13.95□□□□□ -0.18
COL9A3-206ENST00000466532 OR1S2Q8NGQ3 325 aa13.95□□□□□ -0.18
COL9A3-206ENST00000466532 C2CD4CQ8TF44 421 aa13.95□□□□□ -0.18
COL9A3-206ENST00000466532 DCANP1Q8TF63 244 aa13.95□□□□□ -0.18
COL9A3-206ENST00000466532 GPR146Q96CH1 333 aa13.95□□□□□ -0.18
COL9A3-206ENST00000466532 KNCNA6PVL3 124 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms