RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 K7EQG2 157 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 HPGDSO60760 199 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 CDS2O95674 445 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 CA1P00915 261 aaPredicted RBP9.89□□□□□ -0.83
CHD3-207ENST00000466233 MIFP14174 115 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 PGAM2P15259 253 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 HTR2BP41595 481 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 AP2S1P53680 142 aaPredicted RBP9.89□□□□□ -0.83
CHD3-207ENST00000466233 DEFB131AP59861 70 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 SPCS3P61009 180 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 MRPS10P82664 201 aaKnown RBP9.89□□□□□ -0.83
CHD3-207ENST00000466233 SURF2Q15527 256 aaPredicted RBP9.89□□□□□ -0.83
CHD3-207ENST00000466233 STHQ8IWL8 128 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 LILRB2Q8N423 598 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 GBGT1Q8N5D6 347 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 TMEM229BQ8NBD8 167 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 C2CD4CQ8TF44 421 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 ENY2Q9NPA8 101 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 COPZ2Q9P299 210 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 KLK11Q9UBX7 282 aa9.89□□□□□ -0.83
CHD3-207ENST00000466233 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 M0QYG6 137 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 APOHP02749 345 aaPredicted RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 CD3DP04234 171 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 SLC25A4P12235 298 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 ZNF182P17025 639 aaPredicted RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 TAS2R19P59542 299 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 YPEL3P61236 119 aaPredicted RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 VBP1P61758 197 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 ZNF124Q15973 351 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 TRPT1Q86TN4 253 aaKnown RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 RABL2AQ9UBK7 228 aaPredicted RBP9.88□□□□□ -0.83
CHD3-207ENST00000466233 RABL2BQ9UNT1 228 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 U3KQE9 123 aa9.88□□□□□ -0.83
CHD3-207ENST00000466233 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 IGHV3OR16-13A0A075B7E8 117 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 IGHV3-74A0A0B4J1X5 117 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 HELTA6NFD8 242 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 IGKV1-17P01599 117 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 IGHV3-48P01763 117 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 OPRK1P41145 380 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 ETV6P41212 452 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 RPL11P62913 178 aaKnown RBP9.87□□□□□ -0.83
CHD3-207ENST00000466233 TRIM16LQ309B1 348 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 C2orf83Q53S99 150 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 NOXA1Q86UR1 476 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 Q8NAQ8 132 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 OR52I2Q8NH67 350 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 DCANP1Q8TF63 244 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 TMEM222Q9H0R3 208 aa9.87□□□□□ -0.83
CHD3-207ENST00000466233 FNDC4Q9H6D8 234 aaPredicted RBP9.87□□□□□ -0.83
CHD3-207ENST00000466233 FAM25AB3EWG3 89 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 FAM25CB3EWG5 89 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 FAM25GB3EWG6 89 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 GABARAPH6UMI1 98 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 GABARAPO95166 117 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 P2RY1P47900 373 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 HOXA1P49639 335 aaPredicted RBP9.86□□□□□ -0.83
CHD3-207ENST00000466233 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
CHD3-207ENST00000466233 DHODHQ02127 395 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 MEF2DQ14814 521 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 IZUMO4Q1ZYL8 232 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 ETFRF1Q6IPR1 90 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 OR1S2Q8NGQ3 325 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 TMEM230Q96A57 120 aa9.86□□□□□ -0.83
CHD3-207ENST00000466233 PIGBOS1A0A0B4J2F0 54 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 GIG44P09565 113 aaPredicted RBP9.85□□□□□ -0.83
CHD3-207ENST00000466233 PI3P19957 117 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 ATP5IP56385 69 aaPredicted RBP9.85□□□□□ -0.83
CHD3-207ENST00000466233 CTF1Q16619 201 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 LEMD1Q68G75 181 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 STEAP1BQ6NZ63 245 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 RPP25LQ8N5L8 163 aaKnown RBP9.85□□□□□ -0.83
CHD3-207ENST00000466233 OR13C8Q8NGS7 320 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 Q8WTZ3 238 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 GLYATL2Q8WU03 294 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 RBPMSQ93062 196 aaKnown RBP9.85□□□□□ -0.83
CHD3-207ENST00000466233 EXTL2Q9UBQ6 330 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 RABAC1Q9UI14 185 aa9.85□□□□□ -0.83
CHD3-207ENST00000466233 TEX13DA0A0J9YY54 714 aaPredicted RBP9.84□□□□□ -0.83
CHD3-207ENST00000466233 RAB3DO95716 219 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 NUTF2P61970 127 aaKnown RBP9.84□□□□□ -0.83
CHD3-207ENST00000466233 SPINK9Q5DT21 86 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 Q6ZRM9 215 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 CENPSQ8N2Z9 138 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 FAM24BQ8N5W8 94 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 IL22RA2Q969J5 263 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 C1QTNF4Q9BXJ3 329 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 FBXL17Q9UF56 701 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 C14orf166Q9Y224 244 aaKnown RBP9.84□□□□□ -0.83
CHD3-207ENST00000466233 TMEM56-RWDD3S4R434 201 aa9.84□□□□□ -0.83
CHD3-207ENST00000466233 KMT2AQ03164 3969 aa9.83□□□□□ -0.84
CHD3-207ENST00000466233 GSTZ1O43708 216 aaPredicted RBP9.83□□□□□ -0.84
CHD3-207ENST00000466233 HNRNPCP07910 306 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHD3-207ENST00000466233 NUP62P37198 522 aaPredicted RBP9.83□□□□□ -0.84
CHD3-207ENST00000466233 SP6Q3SY56 376 aa9.83□□□□□ -0.84
CHD3-207ENST00000466233 GPR107Q5VW38 600 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms