RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF329Q86UD4 541 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 MDS2Q8NDY4 140 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 OR9G1Q8NH87 305 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 COL27A1Q8IZC6 1860 aaPredicted RBP16.07■□□□□ 0.16
SDF4-205ENST00000465727 SYS1-DBNDD2H3BUS1 97 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 RNF151Q2KHN1 245 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 LINC00479Q96M42 142 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 SPRY4Q9C004 299 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 TMEM191AQ9H0A3 160 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 HSBP1L1C9JCN9 74 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 HBBP68871 147 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 BVES-AS1Q5T3Y7 98 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 PEAR1Q5VY43 1037 aaPredicted RBP16.06■□□□□ 0.16
SDF4-205ENST00000465727 OR1L4Q8NGR5 311 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 URB1-AS1Q96HZ7 61 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 SSBP4Q9BWG4 385 aaPredicted RBP16.06■□□□□ 0.16
SDF4-205ENST00000465727 CST9LQ9H4G1 147 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 C7orf69Q9H7B7 122 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 SPRR3Q9UBC9 169 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 WASHC3Q9Y3C0 194 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 RNASE2P10153 161 aaKnown RBP16.06■□□□□ 0.16
SDF4-205ENST00000465727 MYOD1P15172 320 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 CA7P43166 264 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 GPR6P46095 362 aaPredicted RBP16.06■□□□□ 0.16
SDF4-205ENST00000465727 CAMPP49913 170 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 FABP6P51161 128 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 KIR3DL3Q8N743 410 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 OR2T6Q8NHC8 308 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 PAXXQ9BUH6 204 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 DEFB127Q9H1M4 99 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 CLEC5AQ9NY25 188 aa16.06■□□□□ 0.16
SDF4-205ENST00000465727 OR5AL1P0C617 328 aa16.05■□□□□ 0.16
SDF4-205ENST00000465727 OCIAD2Q56VL3 154 aa16.05■□□□□ 0.16
SDF4-205ENST00000465727 C1orf162Q8NEQ5 155 aaPredicted RBP16.05■□□□□ 0.16
SDF4-205ENST00000465727 TEX50A0A1B0GTY4 177 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 NUDT3O95989 172 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 C17orf58Q2M2W7 97 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 CT83Q5H943 113 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 FREM2Q5SZK8 3169 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 KBTBD11-OT1A0A1B0GTJ5 212 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 COX7A2P2O60397 106 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 LEPROTL1O95214 131 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 ACP1P24666 158 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 BPIFB3P59826 476 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 MS4A6AQ9H2W1 248 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 FZR1Q9UM11 496 aa16.04■□□□□ 0.16
SDF4-205ENST00000465727 TRAV5A0A0B4J249 113 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 IGHV1-24A0A0C4DH33 117 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 CD46P15529 392 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 LDLRAD2Q5SZI1 272 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 MORN5Q5VZ52 161 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 SSX8Q7RTT4 187 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 ZNRF1Q8ND25 227 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 VPS25Q9BRG1 176 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 FRYLO94915 3013 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 C10orf113Q5VZT2 155 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 PRR27Q6MZM9 219 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 PET117Q6UWS5 81 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 LEAP2Q969E1 77 aa16.03■□□□□ 0.16
SDF4-205ENST00000465727 TECTAO75443 2155 aa16.02■□□□□ 0.16
SDF4-205ENST00000465727 A8MWL6 223 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 VWC2LB2RUY7 222 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 PATE3B3GLJ2 98 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 INS-IGF2F8WCM5 200 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 CD5LO43866 347 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 LIPFP07098 398 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 CECR9P0C854 216 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 TMEM30BQ3MIR4 351 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 ETFRF1Q6IPR1 90 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 OR2Z1Q8NG97 314 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 RPP21Q9H633 154 aaKnown RBP16.02■□□□□ 0.15
SDF4-205ENST00000465727 SCRT2Q9NQ03 307 aa16.02■□□□□ 0.15
SDF4-205ENST00000465727 M0QZ24 198 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 AGFG2O95081 481 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 MYCNOSP40205 109 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 ST6GALNAC6Q969X2 333 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 KLF12Q9Y4X4 402 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 DSCAML1Q8TD84 2053 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 FRYQ5TBA9 3013 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 PYYP10082 97 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 HIST1H1AQ02539 215 aaPredicted RBP16.01■□□□□ 0.15
SDF4-205ENST00000465727 STXBP6Q8NFX7 210 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 GFRA4Q9GZZ7 299 aa16.01■□□□□ 0.15
SDF4-205ENST00000465727 IGLV1-44P01699 117 aa16■□□□□ 0.15
SDF4-205ENST00000465727 ERHP84090 104 aaKnown RBP16■□□□□ 0.15
SDF4-205ENST00000465727 MLANAQ16655 118 aa16■□□□□ 0.15
SDF4-205ENST00000465727 FXYD5Q96DB9 178 aa16■□□□□ 0.15
SDF4-205ENST00000465727 GPR82Q96P67 336 aa16■□□□□ 0.15
SDF4-205ENST00000465727 MAP1LC3CQ9BXW4 147 aa16■□□□□ 0.15
SDF4-205ENST00000465727 MUC21A0A0G2JKD1 596 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 MUC21A0A140T8X8 626 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 hDV102S1A0JD36 115 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 OR2T8A6NH00 312 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 C9orf172C9J069 976 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 PSG1P11464 419 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 GUSBP1Q15486 140 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 MUC21Q5SSG8 566 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 UTF1Q5T230 341 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 ASPHD1Q5U4P2 390 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 NDFIP1Q9BT67 221 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms