RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 RNASE10Q5GAN6 216 aaKnown RBP10.65□□□□□ -0.7
HDAC6-214ENST00000465269 FAAP20Q6NZ36 180 aa10.65□□□□□ -0.7
HDAC6-214ENST00000465269 DHRS11Q6UWP2 260 aa10.65□□□□□ -0.7
HDAC6-214ENST00000465269 TCF24Q7RTU0 167 aa10.65□□□□□ -0.7
HDAC6-214ENST00000465269 OR6F1Q8NGZ6 308 aa10.65□□□□□ -0.7
HDAC6-214ENST00000465269 S100ZQ8WXG8 99 aa10.65□□□□□ -0.7
HDAC6-214ENST00000465269 BSCL2Q96G97 398 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-214ENST00000465269 LINC00854A0A1B0GVQ3 168 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
HDAC6-214ENST00000465269 YIF1AO95070 293 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 PPYP01298 95 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 APOHP02749 345 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-214ENST00000465269 AKAIN1P0CW23 69 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 MAS1LP35410 378 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 INPP1P49441 399 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 TRPT1Q86TN4 253 aaKnown RBP10.64□□□□□ -0.71
HDAC6-214ENST00000465269 TOMM5Q8N4H5 51 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 CSNK1G2-AS1Q8NCQ2 148 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 SECTM1Q8WVN6 248 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 TRIM63Q969Q1 353 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 MS4A6AQ9H2W1 248 aa10.64□□□□□ -0.71
HDAC6-214ENST00000465269 IGLV2-14P01704 120 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 HTN3P15516 51 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 PPP5CP53041 499 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 EMP1P54849 157 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 HERV-K104P61576 105 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 ZNF846Q147U1 533 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 RNF212Q495C1 297 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 TRIQKQ629K1 86 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 SLC25A24Q6NUK1 477 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 TMEM17Q86X19 198 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 C6orf223Q8N319 242 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 OR4C16Q8NGL9 310 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 VSTM2AQ8TAG5 236 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 VN1R17PQ8TDU5 208 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 SCARB1Q8WTV0 552 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 TCTEX1D2Q8WW35 142 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 ST8SIA2Q92186 375 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 SLC5A7Q9GZV3 580 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 CCL28Q9NRJ3 127 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 PRELID3BQ9Y3B1 194 aa10.63□□□□□ -0.71
HDAC6-214ENST00000465269 DISC1C4P0D8 188 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 IL7P13232 177 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 TBPP20226 339 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 KLF9Q13886 244 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-214ENST00000465269 SCGB2B2Q4G0G5 96 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 Q56UQ5 140 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 OR4S2Q8NH73 311 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 HRASLSQ9HDD0 168 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 TMEM14BQ9NUH8 114 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 MCUBQ9NWR8 336 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 C21orf62Q9NYP8 219 aa10.62□□□□□ -0.71
HDAC6-214ENST00000465269 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-214ENST00000465269 DFFBO76075 338 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 CTSGP08311 255 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 NPY1RP25929 384 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDAC6-214ENST00000465269 AP3S2P59780 193 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 MEF2DQ14814 521 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 Q5VSD8 79 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 MORN3Q6PF18 240 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-214ENST00000465269 SPSB3Q6PJ21 355 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 OR51S1Q8NGJ8 323 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 MOB3AQ96BX8 217 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 WDR12Q9GZL7 423 aaKnown RBP10.61□□□□□ -0.71
HDAC6-214ENST00000465269 THYN1Q9P016 225 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 RABAC1Q9UI14 185 aa10.61□□□□□ -0.71
HDAC6-214ENST00000465269 NBDYA0A0U1RRE5 68 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 TNFSF12O43508 249 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 OR13C7P0DN81 318 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 GNRHRP30968 328 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 RPL11P62913 178 aaKnown RBP10.6□□□□□ -0.71
HDAC6-214ENST00000465269 WT1-ASQ06250 92 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 ACTL10Q5JWF8 245 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 AADACL3Q5VUY0 350 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 ARRDC1Q8N5I2 433 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 TERB2Q8NHR7 220 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 FXYD6Q9H0Q3 95 aa10.6□□□□□ -0.71
HDAC6-214ENST00000465269 TRAV14DV4A0A0A6YYC5 116 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 K7EIM0 57 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 SLC22A5O76082 557 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 IGHV3-48P01763 117 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 SPP1P10451 314 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 PGAM2P15259 253 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 FAUP35544 74 aaKnown RBP10.59□□□□□ -0.71
HDAC6-214ENST00000465269 PAFAH1B2P68402 229 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 EIF4EBP1Q13541 118 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-214ENST00000465269 TMEM88Q6PEY1 159 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 ZNF818PQ6ZRF7 136 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 LHFPL1Q86WI0 220 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
HDAC6-214ENST00000465269 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
HDAC6-214ENST00000465269 MARCH1Q8TCQ1 289 aa10.58□□□□□ -0.72
HDAC6-214ENST00000465269 OR10C1Q96KK4 312 aa10.58□□□□□ -0.72
HDAC6-214ENST00000465269 PRRT1Q99946 306 aa10.58□□□□□ -0.72
HDAC6-214ENST00000465269 XCL2Q9UBD3 114 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms