RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 URB1-AS1Q96HZ7 61 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 FAM167A-AS1Q96KT0 104 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 SLC25A2Q9BXI2 301 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 DSCAMO60469 2012 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 IGHV2OR16-5A0A0B4J2B6 119 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 E7EUB6 86 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 MGST3O14880 152 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 IGKV3-15P01624 115 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 C8orf88P0DMB2 117 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 MOGAT3Q86VF5 341 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 OR4C5Q8NGB2 326 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 OR2D3Q8NGH3 330 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 C22orf15Q8WYQ4 148 aa10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 MRPS16Q9Y3D3 137 aaKnown RBP10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 AMMECR1Q9Y4X0 333 aaPredicted RBP10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 INTS1Q8N201 2190 aaKnown RBP10.25□□□□□ -0.77
CLCNKA-204ENST00000464764 TEX50A0A1B0GTY4 177 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 hDV102S1A0JD36 115 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 IGLC7A0M8Q6 106 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 HIGD1CA8MV81 97 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 REG1AP05451 166 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 UBE2G1P62253 170 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 FBLN7Q53RD9 439 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 MPV17L2Q567V2 206 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 VHLLQ6RSH7 139 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 ZNF841Q6ZN19 808 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 TCF24Q7RTU0 167 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 OR8B3Q8NGG8 313 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 TNRC18O15417 2968 aaPredicted RBP10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 H0YJW9 148 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 F2RL2O00254 374 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 TOMM40O96008 361 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 PKDREJQ9NTG1 2253 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 DMXL1Q9Y485 3027 aa10.24□□□□□ -0.77
CLCNKA-204ENST00000464764 A0A1W2PRE2 83 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 SRRM5B3KS81 715 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 HOXC12P31275 282 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 CA7P43166 264 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 Q6ZT83 130 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 ADGRG4Q8IZF6 3080 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 DYSFO75923 2080 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 TACC2O95359 2948 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 CSMD1Q96PZ7 3565 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 TBR1Q16650 682 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 ANKRD39Q53RE8 183 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 CORO2AQ92828 525 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 MBD6Q96DN6 1003 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 OR2V2Q96R30 315 aa10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 MRPL27Q9P0M9 148 aaKnown RBP10.23□□□□□ -0.77
CLCNKA-204ENST00000464764 H3BTX0 84 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 SPRY3O43610 288 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 ZNF138P52744 262 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 TCTAP57738 103 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 TAS2R45P59539 299 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 C21orf140B9A014 251 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 KIR2DL2P43627 348 aaPredicted RBP10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 PRCDQ00LT1 54 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 COX19Q49B96 90 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 LINC00322Q6ZN03 302 aaPredicted RBP10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 MUC15Q8N387 334 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 VPS25Q9BRG1 176 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 ARL2-SNX15V9GYD0 113 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 CT45A6P0DMU7 189 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 CT45A5P0DMU8 189 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 CT45A7P0DMV0 189 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 CGB3P0DN86 165 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 CGB7P0DN87 165 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 RNASE2P10153 161 aaKnown RBP10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 TNFSF4P23510 183 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
CLCNKA-204ENST00000464764 IGHV1-18A0A0C4DH31 117 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 UPK2O00526 184 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 ACP1P24666 158 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 KIR2DS2P43631 304 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 ZNF137PP52743 207 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 FOXE3Q13461 319 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 COTL1Q14019 142 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 PATE2Q6UY27 113 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 C9orf106Q8NAJ2 232 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 BLNKQ8WV28 456 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 WASHC3Q9Y3C0 194 aa10.21□□□□□ -0.77
CLCNKA-204ENST00000464764 IGHV2-70DA0A0C4DH43 119 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 IGHV1-69-2A0A0G2JMI3 117 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 PSMB11A5LHX3 300 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 OR4C46A6NHA9 309 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 SNAI2O43623 268 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 REG1BP48304 166 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 C10orf55Q5SWW7 151 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 RUSC1-AS1Q66K80 236 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 ZNF329Q86UD4 541 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 PNKDQ8N490 385 aa10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 MRPL36Q9P0J6 103 aaKnown RBP10.21□□□□□ -0.78
CLCNKA-204ENST00000464764 PEX7O00628 323 aa10.2□□□□□ -0.78
CLCNKA-204ENST00000464764 NUDT3O95989 172 aa10.2□□□□□ -0.78
CLCNKA-204ENST00000464764 SAA1P0DJI8 122 aaPredicted RBP10.2□□□□□ -0.78
CLCNKA-204ENST00000464764 CR1LQ2VPA4 569 aa10.2□□□□□ -0.78
CLCNKA-204ENST00000464764 FAM120AOSQ5T036 256 aa10.2□□□□□ -0.78
CLCNKA-204ENST00000464764 GRAMD2BQ96HH9 432 aa10.2□□□□□ -0.78
CLCNKA-204ENST00000464764 COMMD5Q9GZQ3 224 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms