RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 SYS1-DBNDD2H3BUS1 97 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 TAX1BP3O14907 124 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 CECR9P0C854 216 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 MYCNOSP40205 109 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 HBBP68871 147 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 VAMP3Q15836 100 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 DEFB125Q8N687 156 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 KIR3DL3Q8N743 410 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 PAXXQ9BUH6 204 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 TMEM191AQ9H0A3 160 aa5.93□□□□□ -1.46
USP48-206ENST00000464577 TRAV5A0A0B4J249 113 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 COX7A2P2O60397 106 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 TOX4O94842 621 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 AGFG2O95081 481 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 IGHV3-13P01766 116 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 IGHV3-7P01780 117 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 OR5AL1P0C617 328 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 FABP6P51161 128 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 BPIFB3P59826 476 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 BVES-AS1Q5T3Y7 98 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 MORN5Q5VZ52 161 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 SLC25A34Q6PIV7 304 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 C12orf54Q6X4T0 127 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 TDHQ8IZJ6 230 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 LINC00479Q96M42 142 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 LINC00574Q9H8X3 128 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 CLEC5AQ9NY25 188 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 ZNF492Q9P255 531 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 FZR1Q9UM11 496 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 KLF12Q9Y4X4 402 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 IGHV3OR15-7A0A075B7D8 119 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 IGHV1-24A0A0C4DH33 117 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 VWC2LB2RUY7 222 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 GPR6P46095 362 aaPredicted RBP5.92□□□□□ -1.46
USP48-206ENST00000464577 MPV17L2Q567V2 206 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 RNFT1Q5M7Z0 435 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 UTF1Q5T230 341 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 C10orf113Q5VZT2 155 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 PET117Q6UWS5 81 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 SSX8Q7RTT4 187 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 SMIM15Q7Z3B0 74 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 TMEM105Q8N8V8 129 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 OR2Z1Q8NG97 314 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 MAFAQ8NHW3 353 aaPredicted RBP5.92□□□□□ -1.46
USP48-206ENST00000464577 LEAP2Q969E1 77 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 FXYD5Q96DB9 178 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 SSBP4Q9BWG4 385 aaPredicted RBP5.92□□□□□ -1.46
USP48-206ENST00000464577 GFRA4Q9GZZ7 299 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 MS4A6AQ9H2W1 248 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 RPP21Q9H633 154 aaKnown RBP5.92□□□□□ -1.46
USP48-206ENST00000464577 ZNF430Q9H8G1 570 aaPredicted RBP5.92□□□□□ -1.46
USP48-206ENST00000464577 VCANP13611 3396 aa5.92□□□□□ -1.46
USP48-206ENST00000464577 HSBP1L1C9JCN9 74 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 CD5LO43866 347 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 LEPROTL1O95214 131 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 FSTL3O95633 263 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 LHBP01229 141 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 LIPFP07098 398 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 CT45A6P0DMU7 189 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 CT45A5P0DMU8 189 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 CT45A7P0DMV0 189 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 PYYP10082 97 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 CAMPP49913 170 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 ZNF841Q6ZN19 808 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 FAM169BQ8N8A8 192 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 THAP8Q8NA92 274 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 ZNRF1Q8ND25 227 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 STXBP6Q8NFX7 210 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 OR2T6Q8NHC8 308 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 OSR1Q8TAX0 266 aaPredicted RBP5.91□□□□□ -1.46
USP48-206ENST00000464577 FAM222BQ8WU58 562 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 FER1L6-AS2Q96M78 137 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 PRSS22Q9GZN4 317 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 SCRT2Q9NQ03 307 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 NDUFA4L2Q9NRX3 87 aa5.91□□□□□ -1.46
USP48-206ENST00000464577 IGHV1-18A0A0C4DH31 117 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 TCRBV4S1A1TA0A5B7 111 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 FAM231BA6NCW3 169 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 SRRM4A7MD48 611 aaKnown RBP5.9□□□□□ -1.46
USP48-206ENST00000464577 A8MWL6 223 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 CORTO00230 105 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 SAA1P0DJI8 122 aaPredicted RBP5.9□□□□□ -1.46
USP48-206ENST00000464577 ERHP84090 104 aaKnown RBP5.9□□□□□ -1.46
USP48-206ENST00000464577 HIST1H1AQ02539 215 aaPredicted RBP5.9□□□□□ -1.46
USP48-206ENST00000464577 OCIAD2Q56VL3 154 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 PRR27Q6MZM9 219 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 PATE2Q6UY27 113 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 SLC25A48Q6ZT89 311 aaKnown RBP5.9□□□□□ -1.46
USP48-206ENST00000464577 TMEM178AQ8NBL3 297 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 GPR82Q96P67 336 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 PMCHL2Q9BQD1 86 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 EPDR1Q9UM22 224 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 WASHC3Q9Y3C0 194 aa5.9□□□□□ -1.46
USP48-206ENST00000464577 C19orf71A6NCJ1 209 aa5.9□□□□□ -1.47
USP48-206ENST00000464577 TM4SF5O14894 197 aa5.9□□□□□ -1.47
USP48-206ENST00000464577 NUDT3O95989 172 aa5.9□□□□□ -1.47
USP48-206ENST00000464577 IGHG3P01860 377 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms