RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ATP5IP56385 69 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 ID3Q02535 119 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 MLANAQ16655 118 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 TMEM170AQ8WVE7 144 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 OR10C1Q96KK4 312 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 ZNF436Q9C0F3 470 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 MAGT1Q9H0U3 335 aa11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 FNDC4Q9H6D8 234 aaPredicted RBP11.05□□□□□ -0.64
SQSTM1-205ENST00000464493 RPS10-NUDT3A0A1W2PQS6 291 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 INMT-MINDY4F8WBC2 141 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 GNG7O60262 68 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 IGLV1-51P01701 117 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 IAPPP10997 89 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 IAH1Q2TAA2 248 aaPredicted RBP11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 OR4D5Q8NGN0 318 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 CIB3Q96Q77 187 aaPredicted RBP11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 GPN1Q9HCN4 374 aaPredicted RBP11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 PALMDQ9NP74 551 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 SORL1Q92673 2214 aa11.04□□□□□ -0.64
SQSTM1-205ENST00000464493 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 WRBO00258 174 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 NDUFA4O00483 81 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 TMEM50AO95807 157 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 RELQ04864 619 aaPredicted RBP11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 ADAMTSL5Q6ZMM2 481 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 HAPLN4Q86UW8 402 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 OR4X1Q8NH49 305 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 MARVELD1Q9BSK0 173 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 GSKIPQ9P0R6 139 aa11.03□□□□□ -0.64
SQSTM1-205ENST00000464493 WI2-2373I1.2A0A1W2PRP0 233 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 TMEM213A2RRL7 107 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 A8MWP6 167 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 FAM25EA8MYX2 175 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 CCSO14618 274 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 CLN5O75503 358 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 LY86O95711 162 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 IFNA4P05014 189 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 SLC25A4P12235 298 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 FOLR2P14207 255 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 SPNP16150 400 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 CBLN1P23435 193 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 ELLP55199 621 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 POLR2GP62487 172 aaKnown RBP eCLIP11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 RAB11AP62491 216 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 RPP30P78346 268 aaKnown RBP11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 TM4SF20Q53R12 229 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 ZBTB8BQ8NAP8 495 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 TMEM190Q8WZ59 177 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 MRPL36Q9P0J6 103 aaKnown RBP11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 UFC1Q9Y3C8 167 aa11.02□□□□□ -0.65
SQSTM1-205ENST00000464493 C5orf51A6NDU8 294 aa11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 SNRPGP15A8MWD9 76 aa11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 PRAF2O60831 178 aa11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 EDN2P20800 178 aa11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 PRSS54Q6PEW0 395 aa11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 PRR25Q96S07 402 aa11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 PAIP2BQ9ULR5 123 aaKnown RBP11.01□□□□□ -0.65
SQSTM1-205ENST00000464493 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 C15orf62A8K5M9 175 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 K7EIL1 84 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 SCGB2A1O75556 95 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 YIF1AO95070 293 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 SCGB1D2O95969 90 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 GPX4P36969 197 aaPredicted RBP11□□□□□ -0.65
SQSTM1-205ENST00000464493 CD69Q07108 199 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 SPANXN5Q5MJ07 72 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 TMEM116Q8NCL8 245 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 DYNLRB2Q8TF09 96 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 CACNG8Q8WXS5 425 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 MARC2Q969Z3 335 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 ZNF414Q96IQ9 312 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 C2orf50Q96LR7 162 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 C20orf24Q9BUV8 137 aa11□□□□□ -0.65
SQSTM1-205ENST00000464493 DAZ1Q9NQZ3 744 aaKnown RBP11□□□□□ -0.65
SQSTM1-205ENST00000464493 TECRQ9NZ01 308 aaKnown RBP11□□□□□ -0.65
SQSTM1-205ENST00000464493 MRPL27Q9P0M9 148 aaKnown RBP11□□□□□ -0.65
SQSTM1-205ENST00000464493 IGHV3OR16-8A0A075B7F1 116 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 K7EMT4 169 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 SSSCA1O60232 199 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 C8orf88P0DMB2 117 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 GP9P14770 177 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 RND2P52198 227 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 GSG1LQ6UXU4 331 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 ZNF600Q6ZNG1 722 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 SLC16A13Q7RTY0 426 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 NPIPB3Q92617 1050 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 SMIM8Q96KF7 97 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 PSENENQ9NZ42 101 aa10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 STRAPQ9Y3F4 350 aaKnown RBP10.99□□□□□ -0.65
SQSTM1-205ENST00000464493 H3BP45 60 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 PTTG1O95997 202 aa10.98□□□□□ -0.65
SQSTM1-205ENST00000464493 MBPP02686 304 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms