RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 MRPL16Q9NX20 251 aaKnown RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 RALYQ9UKM9 306 aaKnown RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 EPDR1Q9UM22 224 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 FOXA2Q9Y261 457 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF835Q9Y2P0 537 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 LOXL2Q9Y4K0 774 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 HILPDAQ9Y5L2 63 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 COL27A1Q8IZC6 1860 aaPredicted RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 MUC22E2RYF6 1773 aaPredicted RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 NOTCH4Q99466 2003 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 IGKV3D-15A0A087WSY6 115 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 FBLL1A6NHQ2 334 aaKnown RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 NXPH1P58417 271 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 ADAMTSL5Q6ZMM2 481 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 OR5AN1Q8NGI8 311 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 MBD6Q96DN6 1003 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 IGF2BP2-AS1Q96M15 143 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF747Q9BV97 191 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 TMUB1Q9BVT8 246 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 IFI27L2Q9H2X8 130 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 GEMIN7Q9H840 131 aaKnown RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 TSSC4Q9Y5U2 329 aaPredicted RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 R4GN57 208 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 ASCC3Q8N3C0 2202 aaKnown RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 CPAMD8Q8IZJ3 1885 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 PPIAL4EA0A075B759 164 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 LOC102723996A0A087X1L8 192 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 LINC00473A8K010 186 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 MGST3O14880 152 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 IGLV2-8P01709 118 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 PPIAL4FP0DN26 164 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 IL11RAQ14626 422 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 C2orf83Q53S99 150 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 BOD1L2Q8IYS8 172 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 TEX45Q8NA69 505 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 OR1L8Q8NGR8 309 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 OR4A5Q8NH83 315 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM131Q92545 1883 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 TEX48A0A1B0GUV7 120 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 SERTM2A0A1B0GWG4 89 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1B0GXF2 115 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1W2PR77 199 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 SH2D7A6NKC9 451 aaPredicted RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 TIMM8AO60220 97 aaPredicted RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 CD69Q07108 199 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 PCOLCEQ15113 449 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 PLGLAQ15195 96 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 GAGE13Q4V321 117 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 PRSS57Q6UWY2 283 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 BHLHA15Q7RTS1 189 aaPredicted RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 FAM168AQ92567 244 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF714Q96N38 554 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 SIGLEC8Q9NYZ4 499 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 MRPS17Q9Y2R5 130 aaKnown RBP3.18□□□□□ -1.9
CCNL1-204ENST00000464316 UNC13CQ8NB66 2214 aa3.18□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV1OR15-9A0A0B4J2B8 117 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 HAX1O00165 279 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 SLC25A17O43808 307 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV3-7P01780 117 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 HBDP02042 147 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 PRCDQ00LT1 54 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM30BQ3MIR4 351 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 C16orf54Q6UWD8 224 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 TUSC5Q8IXB3 177 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 BCL6BQ8N143 479 aaPredicted RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 FER1L6-AS2Q96M78 137 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 FGF23Q9GZV9 251 aaPredicted RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 CRISPLD2Q9H0B8 497 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 PILRBQ9UKJ0 227 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 ESPL1Q14674 2120 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV1-45A0A0A0MS14 117 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 KBTBD11-OT1A0A1B0GTJ5 212 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1B0GWB2 263 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 DKK1O94907 266 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 MT-CO3P00414 261 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 PRSS1P07477 247 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 PRDX2P32119 198 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 MPV17P39210 176 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 SRSF6Q13247 344 aaKnown RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 EIF4EBP1Q13541 118 aaPredicted RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 CFAP161Q6P656 301 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 FAM214BQ7L5A3 538 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF329Q86UD4 541 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 GGNQ86UU5 652 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 VKORC1L1Q8N0U8 176 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 TTC9CQ8N5M4 171 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 GCSAMQ8N6F7 178 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 KIR3DL3Q8N743 410 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 FAM222BQ8WU58 562 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 CT55Q8WUE5 264 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 IFI27L1Q96BM0 104 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF479Q96JC4 524 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 IMMP1LQ96LU5 166 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 HIGD1BQ9P298 99 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 A6NJY4 79 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 PRSS46E5RG02 174 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM262E9PQX1 116 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 PSPNO60542 156 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms