RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RNF183Q96D59 192 aa13.94□□□□□ -0.18
SF3A1-205ENST00000463818 A0A0G2JRQ6 117 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 FABP12A6NFH5 140 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 RNASE2P10153 161 aaKnown RBP13.93□□□□□ -0.18
SF3A1-205ENST00000463818 MLANAQ16655 118 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 Q6ZRM9 215 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 LYG2Q86SG7 212 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 LILRB2Q8N423 598 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 GINS3Q9BRX5 216 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 RTBDNQ9BSG5 229 aaPredicted RBP13.93□□□□□ -0.18
SF3A1-205ENST00000463818 MAP6D1Q9H9H5 199 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 ENY2Q9NPA8 101 aa13.93□□□□□ -0.18
SF3A1-205ENST00000463818 HYDINQ4G0P3 5121 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 ANKRD20A5PA0PJZ0 165 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 B3GALNT1O75752 331 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 APOHP02749 345 aaPredicted RBP13.92□□□□□ -0.18
SF3A1-205ENST00000463818 HOXA1P49639 335 aaPredicted RBP13.92□□□□□ -0.18
SF3A1-205ENST00000463818 EWSR1Q01844 656 aaKnown RBP eCLIP13.92□□□□□ -0.18
SF3A1-205ENST00000463818 TNFRSF9Q07011 255 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 MEF2DQ14814 521 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 ZNF79Q15937 498 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 ZNF124Q15973 351 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 FAAP20Q6NZ36 180 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 ZNF600Q6ZNG1 722 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 TCF24Q7RTU0 167 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 RNASE11Q8TAA1 199 aaKnown RBP13.92□□□□□ -0.18
SF3A1-205ENST00000463818 ST8SIA2Q92186 375 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 TRIM63Q969Q1 353 aa13.92□□□□□ -0.18
SF3A1-205ENST00000463818 PUS1Q9Y606 427 aaKnown RBP eCLIP13.92□□□□□ -0.18
SF3A1-205ENST00000463818 CDS2O95674 445 aa13.91□□□□□ -0.18
SF3A1-205ENST00000463818 S100A5P33763 92 aa13.91□□□□□ -0.18
SF3A1-205ENST00000463818 PAFAH1B2P68402 229 aa13.91□□□□□ -0.18
SF3A1-205ENST00000463818 GLYATL2Q8WU03 294 aa13.91□□□□□ -0.18
SF3A1-205ENST00000463818 DEDD2Q8WXF8 326 aa13.91□□□□□ -0.18
SF3A1-205ENST00000463818 TMEM222Q9H0R3 208 aa13.91□□□□□ -0.18
SF3A1-205ENST00000463818 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
SF3A1-205ENST00000463818 C14orf166Q9Y224 244 aaKnown RBP13.91□□□□□ -0.18
SF3A1-205ENST00000463818 EPPK1P58107 5090 aaKnown RBP13.9□□□□□ -0.18
SF3A1-205ENST00000463818 IGHV3-66A0A0C4DH42 116 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 TEX13DA0A0J9YY54 714 aaPredicted RBP13.9□□□□□ -0.18
SF3A1-205ENST00000463818 A0A1B0GU03 582 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 CXorf65A6NEN9 183 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 DISC1C4P0D8 188 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 CORTO00230 105 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 DFFBO76075 338 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 CD5P06127 495 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 OR5AC1P0C628 307 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 SPCS3P61009 180 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 PMS2P11Q13670 270 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 FNDC4Q9H6D8 234 aaPredicted RBP13.9□□□□□ -0.18
SF3A1-205ENST00000463818 ZFAND3Q9H8U3 227 aa13.9□□□□□ -0.18
SF3A1-205ENST00000463818 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.9□□□□□ -0.18
SF3A1-205ENST00000463818 MRPL36Q9P0J6 103 aaKnown RBP13.9□□□□□ -0.18
SF3A1-205ENST00000463818 CLN5O75503 358 aa13.89□□□□□ -0.19
SF3A1-205ENST00000463818 AKAIN1P0CW23 69 aa13.89□□□□□ -0.19
SF3A1-205ENST00000463818 FAM219AQ8IW50 185 aa13.89□□□□□ -0.19
SF3A1-205ENST00000463818 SELENOHQ8IZQ5 122 aaKnown RBP13.89□□□□□ -0.19
SF3A1-205ENST00000463818 OR4C16Q8NGL9 310 aa13.89□□□□□ -0.19
SF3A1-205ENST00000463818 LHFPL5Q8TAF8 219 aa13.89□□□□□ -0.19
SF3A1-205ENST00000463818 NAA60Q9H7X0 242 aa13.89□□□□□ -0.19
SF3A1-205ENST00000463818 GPR132Q9UNW8 380 aa13.89□□□□□ -0.19
SF3A1-205ENST00000463818 MPTX1A8MV57 137 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 DNASE2O00115 360 aaPredicted RBP13.88□□□□□ -0.19
SF3A1-205ENST00000463818 OPRK1P41145 380 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 RPL11P62913 178 aaKnown RBP13.88□□□□□ -0.19
SF3A1-205ENST00000463818 DHODHQ02127 395 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 SURF2Q15527 256 aaPredicted RBP13.88□□□□□ -0.19
SF3A1-205ENST00000463818 BSXQ3C1V8 233 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 AARDQ4LEZ3 155 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 OR4X1Q8NH49 305 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 OR52E5Q8NH55 327 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 GPR146Q96CH1 333 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 MS4A6AQ9H2W1 248 aa13.88□□□□□ -0.19
SF3A1-205ENST00000463818 A6NHS1 94 aa13.87□□□□□ -0.19
SF3A1-205ENST00000463818 NPPCP23582 126 aa13.87□□□□□ -0.19
SF3A1-205ENST00000463818 KLF9Q13886 244 aaPredicted RBP13.87□□□□□ -0.19
SF3A1-205ENST00000463818 SPANXN2Q5MJ10 180 aa13.87□□□□□ -0.19
SF3A1-205ENST00000463818 LINC00299Q6ZSB3 139 aa13.87□□□□□ -0.19
SF3A1-205ENST00000463818 RBPMSQ93062 196 aaKnown RBP13.87□□□□□ -0.19
SF3A1-205ENST00000463818 TMEM230Q96A57 120 aa13.87□□□□□ -0.19
SF3A1-205ENST00000463818 PRRT1Q99946 306 aa13.87□□□□□ -0.19
SF3A1-205ENST00000463818 BIRC6Q9NR09 4857 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 CRYM-AS1A6NIL9 109 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 ATF4P18848 351 aaPredicted RBP13.86□□□□□ -0.19
SF3A1-205ENST00000463818 HTR2BP41595 481 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 TMEM268Q5VZI3 342 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 CEMP1Q6PRD7 247 aaPredicted RBP13.86□□□□□ -0.19
SF3A1-205ENST00000463818 OR51S1Q8NGJ8 323 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 SRRQ9GZT4 340 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 TMEM231Q9H6L2 316 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 HEYLQ9NQ87 328 aaPredicted RBP13.86□□□□□ -0.19
SF3A1-205ENST00000463818 CACNG5Q9UF02 275 aa13.86□□□□□ -0.19
SF3A1-205ENST00000463818 A0A1W2PS18 150 aa13.85□□□□□ -0.19
SF3A1-205ENST00000463818 NUPR2A6NF83 97 aa13.85□□□□□ -0.19
SF3A1-205ENST00000463818 DEFB131AP59861 70 aa13.85□□□□□ -0.19
SF3A1-205ENST00000463818 TIGITQ495A1 244 aa13.85□□□□□ -0.19
SF3A1-205ENST00000463818 TMEM217Q8N7C4 229 aa13.85□□□□□ -0.19
SF3A1-205ENST00000463818 METTL26Q96S19 204 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms