RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MAP1LC3AQ9H492 121 aa2.97□□□□□ -1.93
COL8A1-205ENST00000463753 CACNG5Q9UF02 275 aa2.97□□□□□ -1.93
COL8A1-205ENST00000463753 MAP1BP46821 2468 aaKnown RBP2.97□□□□□ -1.93
COL8A1-205ENST00000463753 ATG2BQ96BY7 2078 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 TET1Q8NFU7 2136 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 TRAV24A0A0B4J272 114 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 CXorf51AA0A1B0GTR3 108 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 TEX50A0A1B0GTY4 177 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 SYNGR2O43760 224 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 FCN3O75636 299 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 PPYP01298 95 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 IGLV3-27P01718 113 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 RBP4P02753 201 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 SLC25A5P05141 298 aaKnown RBP2.96□□□□□ -1.94
COL8A1-205ENST00000463753 OR9G9P0C7N8 305 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 SMIM10L1P0DMW3 83 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 FCGR2AP12318 317 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 WASP42768 502 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 ATP5IP56385 69 aaPredicted RBP2.96□□□□□ -1.94
COL8A1-205ENST00000463753 MRPS21P82921 87 aaKnown RBP2.96□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF816Q0VGE8 651 aaPredicted RBP2.96□□□□□ -1.94
COL8A1-205ENST00000463753 FAM120AOSQ5T036 256 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 PQLC2Q6ZP29 291 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF818PQ6ZRF7 136 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 PCP2Q8IVA1 136 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 OR5AS1Q8N127 324 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 OR8A1Q8NGG7 326 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 SMIM10Q96HG1 83 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 SPRY4Q9C004 299 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 LYRM4Q9HD34 91 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 THADAQ6YHU6 1953 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 TDRD6O60522 2096 aaKnown RBP2.96□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1D-42A0A075B6H8 117 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 CENPVL3A0A0U1RRI6 287 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 H3BVH4 76 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 NCR2O95944 276 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 OR5AL1P0C617 328 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 ARL14EPLP0DKL9 152 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 EDN2P20800 178 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 COL8A2P25067 703 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 FCER1GP30273 86 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 DRD3P35462 400 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 KISS1Q15726 138 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 KIF26BQ2KJY2 2108 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 CENPWQ5EE01 88 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 SLC35E4Q6ICL7 350 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 RBMXL3Q8N7X1 1067 aaKnown RBP2.96□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM52Q8NDY8 209 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 OR1L1Q8NH94 360 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 GTSF1Q8WW33 167 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 H1FXQ92522 213 aaKnown RBP2.96□□□□□ -1.94
COL8A1-205ENST00000463753 DEPPQ9NTK1 212 aa2.96□□□□□ -1.94
COL8A1-205ENST00000463753 DYSFO75923 2080 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 MYO18BQ8IUG5 2567 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 TRAV4A0A0B4J268 109 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 C5orf49A4QMS7 147 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 SPRY1O43609 319 aaPredicted RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 STC2O76061 302 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 EML2O95834 649 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 FGF6P10767 208 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 TNFRSF1AP19438 455 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF137PP52743 207 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 PCOLCEQ15113 449 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 SPINK9Q5DT21 86 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 PPP1R32Q7Z5V6 425 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 Q8N1Y9 231 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF808Q8N4W9 903 aaPredicted RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 CDRT4Q8N9R6 151 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 C16orf52Q8NHV5 167 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF502Q8TBZ5 544 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 URB1-AS1Q96HZ7 61 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 CCDC140Q96MF4 163 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 GPX7Q96SL4 187 aaPredicted RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 LIN7CQ9NUP9 197 aaKnown RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 YTHDF2Q9Y5A9 579 aaKnown RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 TRPM6Q9BX84 2022 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 COL6A3P12111 3177 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 LRRK1Q38SD2 2015 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 LINC01548A6NM66 108 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 A8MWL6 223 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 C21orf140B9A014 251 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 IGLL5B9A064 214 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 HSPB6O14558 160 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 CRXO43186 299 aaPredicted RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 NUDT14O95848 222 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1D-16P01601 117 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 REG1BP48304 166 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 CLRN1P58418 232 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 GNG5P63218 68 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 PRDX1Q06830 199 aaKnown RBP2.95□□□□□ -1.94
COL8A1-205ENST00000463753 MZT1Q08AG7 82 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 DEFB134Q4QY38 66 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM196Q5HYL7 178 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 GDF5OSQ5U4N7 250 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 TXNDC8Q6A555 127 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 Q6ZRM9 215 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 MOGAT3Q86VF5 341 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 DEFB124Q8NES8 71 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 OR4X2Q8NGF9 303 aa2.95□□□□□ -1.94
COL8A1-205ENST00000463753 IL1F10Q8WWZ1 152 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms