RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 NLRC5Q86WI3 1866 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV3-66A0A0C4DH42 116 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 ATP5LO75964 103 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 RPL23P62829 140 aaKnown RBP11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 MDC1Q14676 2089 aaKnown RBP11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV1-8P0DP01 117 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 FABP2P12104 132 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 CFPP27918 469 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 A0A0G2JNJ9 132 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 M0R1W7 72 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 CD177Q8N6Q3 437 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 KCNS1Q96KK3 526 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 Q9UFV3 132 aa11.13□□□□□ -0.63
CHRNA4-202ENST00000463705 SLC17A3O00476 420 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 WNT2P09544 360 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 ATRAIDQ6UW56 229 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 TMEM136Q6ZRR5 245 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 DDTP30046 118 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 PRSS8Q16651 343 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 ASCL4Q6XD76 172 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 EPDR1Q9UM22 224 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 SCN8AQ9UQD0 1980 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 DUSP14O95147 198 aaKnown RBP11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 RHOGP84095 191 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 PTPRDP23468 1912 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 H3BVH4 76 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 YAE1D1Q9NRH1 226 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 TANC1Q9C0D5 1861 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 CD55P08174 381 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 LY6DQ14210 128 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 Q6P435 159 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 LINC00518Q8N0U6 118 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 C8orf46Q8TAG6 207 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 WFDC1Q9HC57 220 aa11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 MRPS16Q9Y3D3 137 aaKnown RBP11.12□□□□□ -0.63
CHRNA4-202ENST00000463705 PLAURQ03405 335 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 C3orf36Q3SXR2 165 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 RNF144BQ7Z419 303 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 FABP5P3A8MUU1 101 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 LYNX1G3V0Z9 82 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 LYNX1P0DP58 116 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 TPTE2P1Q5T6R2 138 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 DUX3Q96PT4 197 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 ALKBH7Q9BT30 221 aaPredicted RBP11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 A0A1B0GW64 132 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 C7orf71A4D174 169 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 EFNB3Q15768 340 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 ZNF318Q5VUA4 2279 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 PSPNO60542 156 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 REC114Q7Z4M0 266 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 GAFA1Q96PS6 74 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
CHRNA4-202ENST00000463705 ADIPOQQ15848 244 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 TMEM167AQ8TBQ9 72 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 TRAV1-1A0A0B4J248 108 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 M0R381 172 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 NMSQ5H8A3 153 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 ORMDL3Q8N138 153 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 DMRTA2Q96SC8 542 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 CACNG7P62955 275 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 RIF1Q5UIP0 2472 aaKnown RBP11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 DPRXA6NFQ7 191 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 C9JCJ5 164 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 APOHP02749 345 aaPredicted RBP11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 VMO1Q7Z5L0 202 aa11.1□□□□□ -0.63
CHRNA4-202ENST00000463705 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 MSRB2Q9Y3D2 182 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV1-3A0A0C4DH29 117 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 TCTAP57738 103 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 MBNL3Q9NUK0 354 aaKnown RBP11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 ESPL1Q14674 2120 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 GAGE10A6NGK3 116 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 IGHV3-11P01762 117 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 SRSF4Q08170 494 aaKnown RBP11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
CHRNA4-202ENST00000463705 GPR179Q6PRD1 2367 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms