RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GPR132Q9UNW8 380 aa15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 C14orf166Q9Y224 244 aaKnown RBP15.18■□□□□ 0.02
PDLIM4-205ENST00000463615 TRAV2A0A0B4J234 112 aa15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 TEX13DA0A0J9YY54 714 aaPredicted RBP15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 OR5AC1P0C628 307 aa15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 DHODHQ02127 395 aa15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 OR4X1Q8NH49 305 aa15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 RBPMSQ93062 196 aaKnown RBP15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 C6orf62Q9GZU0 229 aaPredicted RBP15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 FNDC4Q9H6D8 234 aaPredicted RBP15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.17■□□□□ 0.02
PDLIM4-205ENST00000463615 CLN5O75503 358 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 AKAIN1P0CW23 69 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 HOXA1P49639 335 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 DEFB135Q30KP9 77 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 FAAP20Q6NZ36 180 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 CLVS1Q8IUQ0 354 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 OR4C16Q8NGL9 310 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 LHFPL5Q8TAF8 219 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 DIRAS2Q96HU8 199 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 PRRT1Q99946 306 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 ENY2Q9NPA8 101 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 PUS1Q9Y606 427 aaKnown RBP eCLIP15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 TMEM56-RWDD3S4R434 201 aa15.16■□□□□ 0.02
PDLIM4-205ENST00000463615 IGHV3-49A0A0A0MS15 119 aa15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 A0A1B0GU03 582 aa15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 CRYM-AS1A6NIL9 109 aa15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 GSTZ1O43708 216 aaPredicted RBP15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 PAFAH1B2P68402 229 aa15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 TCF24Q7RTU0 167 aa15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 LYG2Q86SG7 212 aa15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 SELENOHQ8IZQ5 122 aaKnown RBP15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 ST8SIA2Q92186 375 aa15.15■□□□□ 0.02
PDLIM4-205ENST00000463615 A0A0J9YWU9 116 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 ANKRD20A5PA0PJZ0 165 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 HTR2BP41595 481 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 IL18Q14116 193 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 APRG1Q8IVJ8 170 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 LILRB2Q8N423 598 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 RNASE11Q8TAA1 199 aaKnown RBP15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 SOSTQ9BQB4 213 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 MRPL36Q9P0J6 103 aaKnown RBP15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 CACFD1Q9UGQ2 172 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 ALMS1Q8TCU4 4167 aa15.14■□□□□ 0.01
PDLIM4-205ENST00000463615 DFFBO76075 338 aa15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 APOHP02749 345 aaPredicted RBP15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 OPRK1P41145 380 aa15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 C2orf83Q53S99 150 aa15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 IL22RA2Q969J5 263 aa15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 CSTL1Q9H114 145 aa15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 TMEM231Q9H6L2 316 aa15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 RSL24D1Q9UHA3 163 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 HYDINQ4G0P3 5121 aa15.13■□□□□ 0.01
PDLIM4-205ENST00000463615 IGHV3OR16-13A0A075B7E8 117 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 TRAV30A0A087WSZ9 112 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 IGHV3-74A0A0B4J1X5 117 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 A0A1W2PS18 150 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 SCGB2A1O75556 95 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 IGKV1-17P01599 117 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 RPL35AP18077 110 aaKnown RBP15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 CRYBB3P26998 211 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 OR51S1Q8NGJ8 323 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 GATAD1Q8WUU5 269 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 GPR146Q96CH1 333 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 SLIRPQ9GZT3 109 aaKnown RBP15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 MS4A6AQ9H2W1 248 aa15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 EPPK1P58107 5090 aaKnown RBP15.12■□□□□ 0.01
PDLIM4-205ENST00000463615 RPS10-NUDT3A0A1W2PQS6 291 aa15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 MPTX1A8MV57 137 aa15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 NPPCP23582 126 aa15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 TFPI2P48307 235 aa15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 EWSR1Q01844 656 aaKnown RBP eCLIP15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 MLANAQ16655 118 aa15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 TMEM268Q5VZI3 342 aa15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 RNASEH2CQ8TDP1 164 aaKnown RBP15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 CACNG5Q9UF02 275 aa15.11■□□□□ 0.01
PDLIM4-205ENST00000463615 NUPR2A6NF83 97 aa15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 ZNF124Q15973 351 aa15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 GBGT1Q8N5D6 347 aa15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 TMEM217Q8N7C4 229 aa15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 TMEM230Q96A57 120 aa15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 SCGB3A2Q96PL1 93 aa15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 HEYLQ9NQ87 328 aaPredicted RBP15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 SCP2D1Q9UJQ7 156 aa15.1■□□□□ 0.01
PDLIM4-205ENST00000463615 IGKV3-7A0A075B6H7 116 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 H3BMQ9 156 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 SLC25A4P12235 298 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 TMEM187Q14656 261 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 NMSQ5H8A3 153 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 PRSS54Q6PEW0 395 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 METTL26Q96S19 204 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 KCNIP3Q9Y2W7 256 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 U3KQE9 123 aa15.09■□□□□ 0.01
PDLIM4-205ENST00000463615 IGLC1P0CG04 106 aa15.08■□□□□ 0
PDLIM4-205ENST00000463615 TNFSF8P32971 234 aa15.08■□□□□ 0
PDLIM4-205ENST00000463615 YPEL3P61236 119 aaPredicted RBP15.08■□□□□ 0
PDLIM4-205ENST00000463615 SLC24A4Q8NFF2 622 aa15.08■□□□□ 0
PDLIM4-205ENST00000463615 OR1S2Q8NGQ3 325 aa15.08■□□□□ 0
PDLIM4-205ENST00000463615 TMEM170AQ8WVE7 144 aa15.08■□□□□ 0
PDLIM4-205ENST00000463615 GRAMD2BQ96HH9 432 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms