RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 CSMD2Q7Z408 3487 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 GPR31O00270 319 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 PLA2G10O15496 165 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 NUDT2P50583 147 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 TSPEAR-AS2P59090 65 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 ARPC4P59998 168 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 RPS20P60866 119 aaKnown RBP1.73□□□□□ -2.13
SMC4-203ENST00000462668 RHOBP62745 196 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 Q8NDZ9 215 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 CT55Q8WUE5 264 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 SCRT1Q9BWW7 348 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 SMDT1Q9H4I9 107 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 PRTFDC1Q9NRG1 225 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 TONSLQ96HA7 1378 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 HYDINQ4G0P3 5121 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 NACAE9PAV3 2078 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 LRCOL1A6NCL2 159 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 MFSD11O43934 449 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 IDO1P14902 403 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
SMC4-203ENST00000462668 ZFP2Q6ZN57 461 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 KRTAP11-1Q8IUC1 163 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 SGPP2Q8IWX5 399 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 TBC1D19Q8N5T2 526 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 MCFD2Q8NI22 146 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 KIFC1Q9BW19 673 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 CHST6Q9GZX3 395 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 SPEF2Q9C093 1822 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 FUT5Q11128 374 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 OR11G2Q8NGC1 345 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 CLDND2Q8NHS1 167 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 PLEKHB2Q96CS7 222 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 C2orf50Q96LR7 162 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 CISHQ9NSE2 258 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 SLC23A2Q9UGH3 650 aa1.73□□□□□ -2.13
SMC4-203ENST00000462668 PCLOQ9Y6V0 5065 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 A0A1B0GV72 72 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 CPMP14384 443 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 RAB4BP61018 213 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 KCNJ8Q15842 424 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 TRIQKQ629K1 86 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 GPR84Q9NQS5 396 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 ACER3Q9NUN7 267 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 UQCC1Q9NVA1 299 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 OPTCQ9UBM4 332 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 RYR2Q92736 4967 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 CELSR1Q9NYQ6 3014 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 ATG12O94817 140 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 WISP3O95389 354 aaPredicted RBP1.72□□□□□ -2.13
SMC4-203ENST00000462668 IGLV7-43P04211 117 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 ZNF806P0C7X5 589 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 KRTAP10-9P60411 292 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 GABARAPL2P60520 117 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 TSNQ15631 228 aaKnown RBP1.72□□□□□ -2.13
SMC4-203ENST00000462668 C2orf83Q53S99 150 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 SDIM1Q6ZPB5 146 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 EXOC3-AS1Q8N2X6 119 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 GDPD1Q8N9F7 314 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 Q8N9L7 120 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 TMEM35BQ8NCS4 154 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 C11orf40Q8WZ69 217 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 KLK6Q92876 244 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 CMSS1Q9BQ75 279 aaKnown RBP1.72□□□□□ -2.13
SMC4-203ENST00000462668 DSCAMO60469 2012 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 MGAQ8IWI9 3026 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 TBPL1P62380 186 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 KRTAP13-2Q52LG2 175 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 LCE3CQ5T5A8 94 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 SLC25A34Q6PIV7 304 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 SCXQ7RTU7 201 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 SLC35F6Q8N357 371 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 SMIM20Q8N5G0 67 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 BPIFB6Q8NFQ5 453 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 TMEM133Q9H2Q1 129 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 KCNIP2Q9NS61 270 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 GINS2Q9Y248 185 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 NF1P21359 2839 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 SCN1AP35498 2009 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 CFAP46Q8IYW2 2715 aa1.72□□□□□ -2.13
SMC4-203ENST00000462668 ANKRD50Q9ULJ7 1429 aa1.71□□□□□ -2.13
SMC4-203ENST00000462668 A0A087WX48 190 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 C19orf71A6NCJ1 209 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 C17orf51A8MQB3 221 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 B4DEV8 164 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 WDR59Q6PJI9 974 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 SPATA12Q7Z6I5 190 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 C12orf29Q8N999 325 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 PBOV1Q9GZY1 135 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 IGLV3-12A0A075B6K2 115 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 DHRS12A0PJE2 317 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 H3BQ85 93 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 ZNF695Q8IW36 515 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 SMCR5Q8TEV8 140 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 DNAJC30Q96LL9 226 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 ZNF471Q9BX82 626 aaPredicted RBP1.71□□□□□ -2.14
SMC4-203ENST00000462668 LYRM2Q9NU23 88 aaPredicted RBP1.71□□□□□ -2.14
SMC4-203ENST00000462668 WDR87Q6ZQQ6 2873 aa1.71□□□□□ -2.14
SMC4-203ENST00000462668 DLG5Q8TDM6 1919 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms