RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FAM219AQ8IW50 185 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 SCARB1Q8WTV0 552 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 CACNG8Q8WXS5 425 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 RRNAD1Q96FB5 475 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 SCGB3A2Q96PL1 93 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 CHRDL1Q9BU40 450 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 SRD5A3Q9H8P0 318 aa5.93□□□□□ -1.46
CDC42BPA-210ENST00000462553 DYNC1H1Q14204 4646 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 IGHV3-35A0A0C4DH35 117 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 IFNA17P01571 189 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 RBMS2Q15434 407 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 TATDN3Q17R31 274 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 DEFB114Q30KQ6 69 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 CNPY1Q3B7I2 92 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 TRIQKQ629K1 86 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 LYZL2Q7Z4W2 148 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMED4Q7Z7H5 227 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR1L6Q8NGR2 347 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR52E5Q8NH55 327 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 RNASE11Q8TAA1 199 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 IL17DQ8TAD2 202 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM170AQ8WVE7 144 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM190Q8WZ59 177 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 BSCL2Q96G97 398 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 ATP6V0BQ99437 205 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 SLC25A21Q9BQT8 299 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 FNDC4Q9H6D8 234 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 C21orf62Q9NYP8 219 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 THYN1Q9P016 225 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 MRPL36Q9P0J6 103 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 PEMTQ9UBM1 199 aa5.92□□□□□ -1.46
CDC42BPA-210ENST00000462553 A0A0B4J2A0 478 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 OR11H12B2RN74 326 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 PLA2G10O15496 165 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 CYB5BO43169 146 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 NDUFB6O95139 128 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 NXPH3O95157 252 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 SFT2D2O95562 160 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 MT-CO2P00403 227 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 IGHV3-48P01763 117 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 CTSGP08311 255 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 C8orf88P0DMB2 117 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 SULT1A3P0DMM9 295 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 SULT1A4P0DMN0 295 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 FOLR2P14207 255 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 HOXA1P49639 335 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 SPCS3P61009 180 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 ERHP84090 104 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 EWSR1Q01844 656 aaKnown RBP eCLIP5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 PPP1R1AQ13522 171 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 TM4SF20Q53R12 229 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM128Q5BJH2 165 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 SPSB3Q6PJ21 355 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 PLET1Q6UQ28 207 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 LRTM2Q8N967 370 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 WDR89Q96FK6 387 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 MLXQ9UH92 298 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 SHPKQ9UHJ6 478 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 FLVCR2Q9UPI3 526 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 KCNIP3Q9Y2W7 256 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 SELENOKQ9Y6D0 94 aa5.91□□□□□ -1.46
CDC42BPA-210ENST00000462553 PKD1P98161 4303 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 LINC00854A0A1B0GVQ3 168 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 DUXBA0A1W2PPF3 345 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 NAP1L6A6NFF2 107 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 NDUFA4O00483 81 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 PITX3O75364 302 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 ANXA3P12429 323 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 CBLN1P23435 193 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 MFAP4P55083 255 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 UBE2MP61081 183 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 SRPXP78539 464 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 SMCO1Q147U7 214 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 FAM106AQ4KMX7 169 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 Q56UQ5 140 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 TMEM61Q8N0U2 210 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 LGI3Q8N145 548 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 CENPSQ8N2Z9 138 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 UBAC2Q8NBM4 344 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 DYNLRB2Q8TF09 96 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 PINX1Q96BK5 328 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 TXN2Q99757 166 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 C7orf50Q9BRJ6 194 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 OVOL2Q9BRP0 275 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 PDCD10Q9BUL8 212 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 HSPB7Q9UBY9 170 aa5.9□□□□□ -1.46
CDC42BPA-210ENST00000462553 AGRNO00468 2067 aa5.9□□□□□ -1.47
CDC42BPA-210ENST00000462553 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGHV3OR16-8A0A075B7F1 116 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 ZNF320A2RRD8 509 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 C9orf170A2RU37 121 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 VAMP1P23763 118 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 ELLP55199 621 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 TNP2Q05952 138 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 TNFRSF9Q07011 255 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 MLANAQ16655 118 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 GUCA2BQ16661 112 aa5.89□□□□□ -1.47
CDC42BPA-210ENST00000462553 C2orf83Q53S99 150 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms