RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 CYSRT1A8MQ03 144 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 B4DSR2 109 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 GPR31O00270 319 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 TOR1AO14656 332 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 PGLYRP1O75594 196 aaPredicted RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 SFT2D2O95562 160 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 DHFRP00374 187 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 HLA-AP01891 365 aaKnown RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 IL5P05113 134 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 OR5AC1P0C628 307 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 AKR1C4P17516 323 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 PRTN3P24158 256 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 COX7A1P24310 79 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 RAB7AP51149 207 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 HNRNPA3P51991 378 aaKnown RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF137PP52743 207 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 RPL30P62888 115 aaKnown RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 KRTAP1-1Q07627 177 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 DHRS2Q13268 280 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 SLC9A3R2Q15599 337 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 RPEL1Q2QD12 228 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 HLA-DRB5Q30154 266 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 ABCA11PQ4W5N1 156 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 TMEM128Q5BJH2 165 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 FAM120AOSQ5T036 256 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 LPCAT3Q6P1A2 487 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF833PQ6ZTB9 187 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 LYG2Q86SG7 212 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 PDZD9Q8IXQ8 264 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 LYG1Q8N1E2 194 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 OR11H6Q8NGC7 330 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 OR4P4Q8NGL7 312 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 OR9G1Q8NH87 305 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 LYPD6BQ8NI32 183 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 LHFPL5Q8TAF8 219 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 RTN4IP1Q8WWV3 396 aaPredicted RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF486Q96H40 463 aaPredicted RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 TP53RKQ96S44 253 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 CLEC7AQ9BXN2 247 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 ACTR3CQ9C0K3 210 aaPredicted RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 PPDPFQ9H3Y8 114 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 METTL8Q9H825 291 aaKnown RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 CLEC5AQ9NY25 188 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 PAIP2BQ9ULR5 123 aaKnown RBP3.64□□□□□ -1.83
CSMD3-205ENST00000462254 KCNIP3Q9Y2W7 256 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 NAV2Q8IVL1 2488 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 MYO9AB2RTY4 2548 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 FLNAP21333 2647 aaKnown RBP3.63□□□□□ -1.83
CSMD3-205ENST00000462254 IGHV3OR16-10A0A075B7F0 116 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 CENPVL3A0A0U1RRI6 287 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 C3orf85A0A1B0GTC6 90 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 A0A1B0GW15 77 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 LY6LH3BQJ8 138 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 BUB1B-PAK6H3BSN5 160 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 M0R1X1 148 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 GOSR2O14653 212 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 SOX15O60248 233 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 PFDN1O60925 122 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 SLC22A5O76082 557 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 DUS4LO95620 317 aaKnown RBP3.63□□□□□ -1.83
CSMD3-205ENST00000462254 IGKV1-39P01597 117 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 IGKV1D-39P04432 117 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 ARG1P05089 322 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 CTRB1P17538 263 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 F2RP25116 425 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 PAX6P26367 422 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 REG1BP48304 166 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 TAS2R31P59538 309 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 UBE2G2P60604 165 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 RRAS2P62070 204 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-205ENST00000462254 OR5I1Q13606 314 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 MSMO1Q15800 293 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 SP6Q3SY56 376 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF585BQ52M93 769 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 OR2B11Q5JQS5 317 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 KLF17Q5JT82 389 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-205ENST00000462254 LINC00242Q5T6M2 205 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 RUSC1-AS1Q66K80 236 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 CTRB2Q6GPI1 263 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 C9orf139Q6ZV77 190 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 SGPP2Q8IWX5 399 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 DYNAPQ8N1N2 210 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 MTURNQ8N3F0 131 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 CCDC71LQ8N9Z2 235 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-205ENST00000462254 OR11H7Q8NGC8 314 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 OR13D1Q8NGV5 346 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 OR10X1Q8NGY0 326 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 OR51H1Q8NH63 302 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF431Q8TF32 576 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-205ENST00000462254 CASTOR1Q8WTX7 329 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 TCTEX1D2Q8WW35 142 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 GALNT14Q96FL9 552 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 SCGB3A2Q96PL1 93 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 NABP2Q9BQ15 211 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 MRPL20Q9BYC9 149 aaKnown RBP3.63□□□□□ -1.83
CSMD3-205ENST00000462254 NAA60Q9H7X0 242 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 HEXA-AS1Q9H8Q6 139 aa3.63□□□□□ -1.83
CSMD3-205ENST00000462254 AUP1Q9Y679 476 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms