RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GLYATL2Q8WU03 294 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 SMIM4Q8WVI0 70 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 GALNT14Q96FL9 552 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 BCL7BQ9BQE9 202 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 RTBDNQ9BSG5 229 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-207ENST00000461798 TMEM222Q9H0R3 208 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 VSIRQ9H7M9 311 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 GPR132Q9UNW8 380 aa6.78□□□□□ -1.32
BRCA1-207ENST00000461798 A0A0G2JRQ6 117 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 TEX13DA0A0J9YY54 714 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-207ENST00000461798 CORTO00230 105 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 SPRY2O43597 315 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 IFNA17P01571 189 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 IGHV3-48P01763 117 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 BMI1P35226 326 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 AKR1C2P52895 323 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 PPP5CP53041 499 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 TMBIM6P55061 237 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 SPCS3P61009 180 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 DHODHQ02127 395 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 TNFRSF9Q07011 255 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 TRIM16LQ309B1 348 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 SCGB2B2Q4G0G5 96 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 ZNF600Q6ZNG1 722 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 STPG3Q8N7X2 389 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 SLC35G3Q8N808 338 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 DYNC2LI1Q8TCX1 351 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 RAB2BQ8WUD1 216 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 PINX1Q96BK5 328 aaKnown RBP6.77□□□□□ -1.33
BRCA1-207ENST00000461798 RNF183Q96D59 192 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 RRNAD1Q96FB5 475 aaKnown RBP6.77□□□□□ -1.33
BRCA1-207ENST00000461798 GINS3Q9BRX5 216 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 MAP6D1Q9H9H5 199 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-207ENST00000461798 UBQLN2Q9UHD9 624 aa6.77□□□□□ -1.33
BRCA1-207ENST00000461798 TRAV2A0A0B4J234 112 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 DISC1C4P0D8 188 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 RGS5O15539 181 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 GSTZ1O43708 216 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-207ENST00000461798 CLN5O75503 358 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 JTBO76095 146 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 OR5AC1P0C628 307 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 AKAIN1P0CW23 69 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 SPINK9Q5DT21 86 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 SELENOHQ8IZQ5 122 aaKnown RBP6.76□□□□□ -1.33
BRCA1-207ENST00000461798 LILRB2Q8N423 598 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 OR4X1Q8NH49 305 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 LHFPL5Q8TAF8 219 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 DIRAS2Q96HU8 199 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 LYSTQ99698 3801 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 SOSTQ9BQB4 213 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 PDCD10Q9BUL8 212 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 C6orf62Q9GZU0 229 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-207ENST00000461798 FNDC4Q9H6D8 234 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-207ENST00000461798 NAA60Q9H7X0 242 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 CCDC59Q9P031 241 aaKnown RBP6.76□□□□□ -1.33
BRCA1-207ENST00000461798 C14orf166Q9Y224 244 aaKnown RBP6.76□□□□□ -1.33
BRCA1-207ENST00000461798 TMEM56-RWDD3S4R434 201 aa6.76□□□□□ -1.33
BRCA1-207ENST00000461798 IGHV3-49A0A0A0MS15 119 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 A0A1B0GU03 582 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 CRYM-AS1A6NIL9 109 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 PAX4O43316 350 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 DFFBO76075 338 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 PAFAH1B2P68402 229 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 MLANAQ16655 118 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 TCF24Q7RTU0 167 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 CLVS1Q8IUQ0 354 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-207ENST00000461798 OR4C16Q8NGL9 310 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 ST8SIA2Q92186 375 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 RBPMSQ93062 196 aaKnown RBP6.75□□□□□ -1.33
BRCA1-207ENST00000461798 GPR146Q96CH1 333 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 PRRT1Q99946 306 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 CSTL1Q9H114 145 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 ENY2Q9NPA8 101 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 MRPL36Q9P0J6 103 aaKnown RBP6.75□□□□□ -1.33
BRCA1-207ENST00000461798 CACFD1Q9UGQ2 172 aa6.75□□□□□ -1.33
BRCA1-207ENST00000461798 RSL24D1Q9UHA3 163 aaKnown RBP6.75□□□□□ -1.33
BRCA1-207ENST00000461798 PUS1Q9Y606 427 aaKnown RBP eCLIP6.75□□□□□ -1.33
BRCA1-207ENST00000461798 IGHV3OR16-13A0A075B7E8 117 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 TRAV30A0A087WSZ9 112 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 IGHV3-74A0A0B4J1X5 117 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 A0A0J9YWU9 116 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 A0A1W2PS18 150 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 ANKRD20A5PA0PJZ0 165 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 IGKV1-17P01599 117 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 APOHP02749 345 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-207ENST00000461798 RPL35AP18077 110 aaKnown RBP6.74□□□□□ -1.33
BRCA1-207ENST00000461798 NPPCP23582 126 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 CRYBB3P26998 211 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 HTR2BP41595 481 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 HOXA1P49639 335 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-207ENST00000461798 IL18Q14116 193 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 DEFB135Q30KP9 77 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 C2orf83Q53S99 150 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 FAAP20Q6NZ36 180 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 LYG2Q86SG7 212 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 APRG1Q8IVJ8 170 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 RNASEH2CQ8TDP1 164 aaKnown RBP6.74□□□□□ -1.33
BRCA1-207ENST00000461798 IL22RA2Q969J5 263 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms