RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 SCARB1Q8WTV0 552 aa13.13□□□□□ -0.31
MRPL28-207ENST00000461550 GPR146Q96CH1 333 aa13.13□□□□□ -0.31
MRPL28-207ENST00000461550 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
MRPL28-207ENST00000461550 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
MRPL28-207ENST00000461550 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 A0A0B4J293 547 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 C9orf170A2RU37 121 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 SCAF4O95104 1147 aaKnown RBP13.12□□□□□ -0.31
MRPL28-207ENST00000461550 P0C879 139 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 M6PRP20645 277 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 C4orf46Q504U0 113 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 Q6ZRM9 215 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 LYZL2Q7Z4W2 148 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 LGI3Q8N145 548 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
MRPL28-207ENST00000461550 F8W735 103 aaPredicted RBP13.11□□□□□ -0.31
MRPL28-207ENST00000461550 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
MRPL28-207ENST00000461550 UBE2MP61081 183 aaKnown RBP13.11□□□□□ -0.31
MRPL28-207ENST00000461550 PRCDQ00LT1 54 aa13.11□□□□□ -0.31
MRPL28-207ENST00000461550 Q56UQ5 140 aa13.11□□□□□ -0.31
MRPL28-207ENST00000461550 OR2C3Q8N628 320 aa13.11□□□□□ -0.31
MRPL28-207ENST00000461550 OR52B4Q8NGK2 314 aa13.11□□□□□ -0.31
MRPL28-207ENST00000461550 IL22RA2Q969J5 263 aa13.11□□□□□ -0.31
MRPL28-207ENST00000461550 BSCL2Q96G97 398 aaPredicted RBP13.11□□□□□ -0.31
MRPL28-207ENST00000461550 DHRS2Q13268 280 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 LYG2Q86SG7 212 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 OR1P1Q8NH06 330 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 TMEM190Q8WZ59 177 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 ZNF436Q9C0F3 470 aaPredicted RBP13.1□□□□□ -0.31
MRPL28-207ENST00000461550 RETNQ9HD89 108 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 UFC1Q9Y3C8 167 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 OR11H12B2RN74 326 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 ZNF207O43670 478 aaKnown RBP13.1□□□□□ -0.31
MRPL28-207ENST00000461550 ADMP35318 185 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
MRPL28-207ENST00000461550 SRPXP78539 464 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 MUC7Q8TAX7 377 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 CACNG5Q9UF02 275 aa13.1□□□□□ -0.31
MRPL28-207ENST00000461550 A0A0B4J2A0 478 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
MRPL28-207ENST00000461550 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
MRPL28-207ENST00000461550 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 HOXB5P09067 269 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
MRPL28-207ENST00000461550 FAM219AQ8IW50 185 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 OR1L6Q8NGR2 347 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
MRPL28-207ENST00000461550 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 SRD5A3Q9H8P0 318 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 SHPKQ9UHJ6 478 aa13.09□□□□□ -0.31
MRPL28-207ENST00000461550 I3L2K1 104 aa13.08□□□□□ -0.32
MRPL28-207ENST00000461550 NXPH3O95157 252 aa13.08□□□□□ -0.32
MRPL28-207ENST00000461550 IFNA17P01571 189 aa13.08□□□□□ -0.32
MRPL28-207ENST00000461550 IL5P05113 134 aa13.08□□□□□ -0.32
MRPL28-207ENST00000461550 C8orf88P0DMB2 117 aa13.08□□□□□ -0.32
MRPL28-207ENST00000461550 SPSB3Q6PJ21 355 aa13.08□□□□□ -0.32
MRPL28-207ENST00000461550 MARC2Q969Z3 335 aa13.08□□□□□ -0.32
MRPL28-207ENST00000461550 MRPL27Q9P0M9 148 aaKnown RBP13.08□□□□□ -0.32
MRPL28-207ENST00000461550 C3orf84H3BNL1 204 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 PRAF2O60831 178 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 MT-CO2P00403 227 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 CTSGP08311 255 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 ELLP55199 621 aaPredicted RBP13.07□□□□□ -0.32
MRPL28-207ENST00000461550 NMSQ5H8A3 153 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 LINC00322Q6ZN03 302 aaPredicted RBP13.07□□□□□ -0.32
MRPL28-207ENST00000461550 SLC16A13Q7RTY0 426 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 ZNF114Q8NC26 417 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 ZNF414Q96IQ9 312 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 HYLS1Q96M11 299 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 CITED4Q96RK1 184 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 FAM110AQ9BQ89 295 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 DAZ1Q9NQZ3 744 aaKnown RBP13.07□□□□□ -0.32
MRPL28-207ENST00000461550 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.07□□□□□ -0.32
MRPL28-207ENST00000461550 ALG5Q9Y673 324 aa13.07□□□□□ -0.32
MRPL28-207ENST00000461550 NDUFA4O00483 81 aa13.06□□□□□ -0.32
MRPL28-207ENST00000461550 ADAP1O75689 374 aa13.06□□□□□ -0.32
MRPL28-207ENST00000461550 SULT1A3P0DMM9 295 aa13.06□□□□□ -0.32
MRPL28-207ENST00000461550 SULT1A4P0DMN0 295 aa13.06□□□□□ -0.32
MRPL28-207ENST00000461550 ERHP84090 104 aaKnown RBP13.06□□□□□ -0.32
MRPL28-207ENST00000461550 Q5BKY6 102 aa13.06□□□□□ -0.32
MRPL28-207ENST00000461550 GGNBP1Q5YKI7 109 aa13.06□□□□□ -0.32
MRPL28-207ENST00000461550 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
MRPL28-207ENST00000461550 DUXBA0A1W2PPF3 345 aa13.05□□□□□ -0.32
MRPL28-207ENST00000461550 AP2S1P53680 142 aaPredicted RBP13.05□□□□□ -0.32
MRPL28-207ENST00000461550 RRAS2P62070 204 aaPredicted RBP13.05□□□□□ -0.32
MRPL28-207ENST00000461550 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
MRPL28-207ENST00000461550 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
MRPL28-207ENST00000461550 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
MRPL28-207ENST00000461550 C7orf66A4D0T2 115 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 NUPL2O15504 423 aaKnown RBP13.04□□□□□ -0.32
MRPL28-207ENST00000461550 HOXA1P49639 335 aaPredicted RBP13.04□□□□□ -0.32
MRPL28-207ENST00000461550 MFAP4P55083 255 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 SMCO1Q147U7 214 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 CASC10Q5T4H9 136 aa13.04□□□□□ -0.32
MRPL28-207ENST00000461550 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms