RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 RCHY1Q96PM5 261 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 TRAV5A0A0B4J249 113 aa7.5□□□□□ -1.21
BRCA1-205ENST00000461221 CHCHD2Q9Y6H1 151 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-205ENST00000461221 FOXL1Q12952 345 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 PSG7Q13046 419 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 OCIAD2Q56VL3 154 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 CT83Q5H943 113 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 INS-IGF2F8WCM5 200 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 INSP01308 110 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 UMODP07911 640 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 GZMBP10144 247 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 MESP2Q0VG99 397 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 DLX4Q92988 240 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-205ENST00000461221 ZNFX1Q9P2E3 1918 aaKnown RBP7.49□□□□□ -1.21
BRCA1-205ENST00000461221 ALS2Q96Q42 1657 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 TNRC6CQ9HCJ0 1690 aaKnown RBP7.49□□□□□ -1.21
BRCA1-205ENST00000461221 C4orf51C9J302 202 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 PSCAO43653 123 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 PYYP10082 97 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 RBMY1FQ15415 496 aaKnown RBP7.49□□□□□ -1.21
BRCA1-205ENST00000461221 GTF3AQ92664 365 aaKnown RBP7.49□□□□□ -1.21
BRCA1-205ENST00000461221 PCM1Q15154 2024 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 TRPM6Q9BX84 2022 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 TNFSF13O75888 250 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 IGHV1-2P23083 117 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 ASCL4Q6XD76 172 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 TRAV8-1A0A0A6YYK1 113 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 DSCR9P59020 149 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 C3orf36Q3SXR2 165 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 MORN2Q502X0 79 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 TEX38Q6PEX7 206 aa7.49□□□□□ -1.21
BRCA1-205ENST00000461221 MYMXA0A1B0GTQ4 84 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 ZNF883P0CG24 379 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 HOXD3P31249 432 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-205ENST00000461221 SIGLEC12Q96PQ1 595 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 TMEM242Q9NWH2 141 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 AKAP11Q9UKA4 1901 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 THBDP07204 575 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 IGFBP3P17936 291 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-205ENST00000461221 PPIFP30405 207 aaKnown RBP7.48□□□□□ -1.21
BRCA1-205ENST00000461221 EFNB3Q15768 340 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 ZNF497Q6ZNH5 498 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 UBE2CO00762 179 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 RFPL3SP0C7P2 107 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 OCC1Q8TAD7 63 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 SCN3AQ9NY46 2000 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 VCYO14598 125 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 CCL3L1P16619 93 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 ERCC8Q13216 396 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 ZNF876PQ49A33 203 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 KLF17Q5JT82 389 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-205ENST00000461221 HAPLN4Q86UW8 402 aa7.48□□□□□ -1.21
BRCA1-205ENST00000461221 TRAV41A0A0B4J266 112 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 ZXDCQ2QGD7 858 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-205ENST00000461221 NSUN5P1Q3KNT7 163 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 GGTLC1Q9BX51 225 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 BCL6BQ8N143 479 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-205ENST00000461221 SLC25A39Q9BZJ4 359 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-205ENST00000461221 A0A1B0GTI1 187 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 NPC2P61916 151 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 CSRP2Q16527 193 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 C6orf226Q5I0X4 101 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-205ENST00000461221 FAM90A2PQ658T7 463 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 KIAA1551Q9HCM1 1747 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 CDKN1AP38936 164 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 EIF4EBP2Q13542 120 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-205ENST00000461221 WDR83OSQ9Y284 106 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 CELA3AP09093 270 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 C1QL4Q86Z23 238 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 IMMP1LQ96LU5 166 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 FBLN5Q9UBX5 448 aa7.47□□□□□ -1.21
BRCA1-205ENST00000461221 LOC105371267A0A1B0GV96 52 aa7.46□□□□□ -1.21
BRCA1-205ENST00000461221 F8VVB4 439 aa7.46□□□□□ -1.21
BRCA1-205ENST00000461221 F8VWA3 439 aa7.46□□□□□ -1.21
BRCA1-205ENST00000461221 SAP30O75446 220 aa7.46□□□□□ -1.21
BRCA1-205ENST00000461221 SPSB3Q6PJ21 355 aa7.46□□□□□ -1.21
BRCA1-205ENST00000461221 NHSQ6T4R5 1651 aa7.46□□□□□ -1.21
BRCA1-205ENST00000461221 CDK5RAP2Q96SN8 1893 aa7.46□□□□□ -1.21
BRCA1-205ENST00000461221 TBX6O95947 436 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-205ENST00000461221 SS18Q15532 418 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 RPRMLQ8N4K4 120 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 C1QTNF4Q9BXJ3 329 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 QSER1Q2KHR3 1735 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 NPIPB5A8MRT5 1133 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 ESDP10768 282 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 CEACAM8P31997 349 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-205ENST00000461221 ITGB4P16144 1822 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms