RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 WNT10AQ9GZT5 417 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 MBNL3Q9NUK0 354 aaKnown RBP5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 NOTCH4Q99466 2003 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 LY6G6EA0A0G2JKS1 128 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 FSHBP01225 129 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CXCL1P09341 107 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CECR9P0C854 216 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PSG1P11464 419 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 COL8A1P27658 744 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 RBM11P57052 281 aaKnown RBP5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 BOD1L2Q8IYS8 172 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 FLVCR1-AS1Q8TAF5 88 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 TMEM140Q9NV12 185 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 U3KQA8 63 aa5.23□□□□□ -1.57
HLA-DQA1-205ENST00000460633 DOCK8Q8NF50 2099 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 IGKV3D-11A0A0A0MRZ8 115 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 TRBV7-1A0A0A6YYK4 115 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 OTX1P32242 354 aaPredicted RBP5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 EMP1P54849 157 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 C10orf128Q5T292 105 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 OR1N2Q8NGR9 330 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CLDND2Q8NHS1 167 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 HIST1H2BLQ99880 126 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CYTL1Q9NRR1 136 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 IGHG3P01860 377 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 MELTFP08582 738 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PRTN3P24158 256 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PMCHL1Q16048 86 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 SLC25A53Q5H9E4 307 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CIARTQ8N365 385 aaPredicted RBP5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 EAF1Q96JC9 268 aaPredicted RBP5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 IMMP1LQ96LU5 166 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PGLYRP1O75594 196 aaPredicted RBP5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 MEIG1Q5JSS6 88 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PVRIGQ6DKI7 326 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 LCNL1Q6ZST4 164 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 LRTM2Q8N967 370 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 TMEM133Q9H2Q1 129 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 IL36RNQ9UBH0 155 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CCDC88CQ9P219 2028 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PRR32B1ATL7 298 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 ZNF324O75467 553 aaPredicted RBP5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CBLN1P23435 193 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PPIFP30405 207 aaKnown RBP5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 ICAM4Q14773 271 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PRSS8Q16651 343 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 MTURNQ8N3F0 131 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 OR8A1Q8NGG7 326 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 HSPB8Q9UJY1 196 aa5.22□□□□□ -1.57
HLA-DQA1-205ENST00000460633 M0R3E3 92 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PLP1P60201 277 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 CCL20P78556 96 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PSG4Q00888 419 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 EGR4Q05215 589 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PIP4P2Q8N4L2 257 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 OR10S1Q8NGN2 331 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 IMMP2LQ96T52 175 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 KLHDC3Q9BQ90 382 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 SCN3AQ9NY46 2000 aa5.21□□□□□ -1.57
HLA-DQA1-205ENST00000460633 C15orf61A6NNL5 157 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CA2P00918 260 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 GZMBP10144 247 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MYCNOSP40205 109 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MFAP2P55001 183 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CACNG7P62955 275 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SFRP2Q96HF1 295 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TMEM70Q9BUB7 260 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NDUFA12Q9UI09 145 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TMEM250H0YL14 139 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SEC11AP67812 179 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OR10J3Q5JRS4 329 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNF818PQ6ZRF7 136 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TEX45Q8NA69 505 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OR2K2Q8NGT1 345 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RNASE8Q8TDE3 154 aaKnown RBP5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 WFDC1Q9HC57 220 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 H3BVH4 76 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 VMO1Q7Z5L0 202 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C1QL2Q7Z5L3 287 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C1QL4Q86Z23 238 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 LHFPL6Q9Y693 200 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SMAD5-AS1Q9Y6J3 95 aa5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNF106Q9H2Y7 1883 aaKnown RBP5.21□□□□□ -1.58
HLA-DQA1-205ENST00000460633 H3BUA1 57 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MT-ND6P03923 174 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 VOPP1Q96AW1 172 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NPVFQ9HCQ7 196 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 A0A0G2JNJ9 132 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 DPRXA6NFQ7 191 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 AMY1AP04745 511 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 HOXD3P31249 432 aaPredicted RBP5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 GAGE1Q13065 139 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MBNL2Q5VZF2 373 aaKnown RBP5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SCGB1D4Q6XE38 83 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 Q96M66 194 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FOXC2Q99958 501 aa5.2□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SRSF8Q9BRL6 282 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms