RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 LYRM2Q9NU23 88 aaPredicted RBP8.58□□□□□ -1.04
SMNDC1-203ENST00000460483 PEF1Q9UBV8 284 aaKnown RBP8.58□□□□□ -1.04
SMNDC1-203ENST00000460483 NF1P21359 2839 aa8.58□□□□□ -1.04
SMNDC1-203ENST00000460483 CCNKO75909 580 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 PF4P02776 101 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 PRH1P02810 166 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 SULT1A1P50225 295 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 CD69Q07108 199 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 C11orf87Q6NUJ2 197 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 ZNF343Q6P1L6 599 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 C11orf44Q8N8P7 122 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 SCARB1Q8WTV0 552 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 TAF15Q92804 592 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 PFDN2Q9UHV9 154 aa8.57□□□□□ -1.04
SMNDC1-203ENST00000460483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 H3BP45 60 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 GGCTO75223 188 aaKnown RBP8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 NDUFB8O95169 186 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 CFDP00746 253 aaPredicted RBP8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 CD33P20138 364 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 MYCNOSP40205 109 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 FAM106AQ4KMX7 169 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 TMEM14EPQ6UXP3 125 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 AKAP14Q86UN6 197 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 LILRB2Q8N423 598 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 UBAC2Q8NBM4 344 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 OR4X1Q8NH49 305 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 CHAC2Q8WUX2 184 aa8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 SETD2Q9BYW2 2564 aaPredicted RBP8.56□□□□□ -1.04
SMNDC1-203ENST00000460483 C15orf62A8K5M9 175 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 LINC01619G3V211 115 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 I3L2K1 104 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 CCL24O00175 119 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 DFFBO76075 338 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 CLEC3BP05452 202 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 METTL15P1P0C7V9 234 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 C4BPBP20851 252 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 BMI1P35226 326 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 ARL3P36405 182 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 AP2S1P53680 142 aaPredicted RBP8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 DLK1P80370 383 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 AKR1C1Q04828 323 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 ZNF616Q08AN1 781 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 RPEL1Q2QD12 228 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 NSUN5P1Q3KNT7 163 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 TCTEX1D4Q5JR98 221 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 OR8G2PQ6IF36 304 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 LCNL1Q6ZST4 164 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 SLC16A13Q7RTY0 426 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 ZNF546Q86UE3 836 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 TMEM252Q8N6L7 170 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 TMEM116Q8NCL8 245 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 OR11H1Q8NG94 326 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 OR1S2Q8NGQ3 325 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 OR1N2Q8NGR9 330 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 ZNF502Q8TBZ5 544 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 GPR61Q9BZJ8 451 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 NPVFQ9HCQ7 196 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 RNF24Q9Y225 148 aa8.55□□□□□ -1.04
SMNDC1-203ENST00000460483 A0A1W2PRX2 142 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 ZFP92A6NM28 416 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 K7EIM0 57 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 TGOLN2O43493 480 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 MPDU1O75352 247 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 CLN5O75503 358 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 IGHV3-11P01762 117 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 LYL1P12980 280 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 RPL12P30050 165 aaKnown RBP8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 PAX9P55771 341 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 C10orf99Q6UWK7 81 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 CLEC19AQ6UXS0 136 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 Q8WTZ3 238 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 WDR89Q96FK6 387 aaPredicted RBP8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 ACY3Q96HD9 319 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 NARS2Q96I59 477 aaKnown RBP8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 MCRIP2Q9BUT9 160 aaKnown RBP8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 GNB4Q9HAV0 340 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 KCNIP2Q9NS61 270 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 UQCC1Q9NVA1 299 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 MBD2Q9UBB5 411 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 PEMTQ9UBM1 199 aa8.54□□□□□ -1.04
SMNDC1-203ENST00000460483 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 FXYD6-FXYD2A0A087WZ82 144 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 SMCO3A2RU48 225 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 FAM24AA6NFZ4 105 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 I3L521 148 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 IFNA5P01569 189 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 GPR183P32249 361 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 MFAP2P55001 183 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 SELENOTP62341 195 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 EWSR1Q01844 656 aaKnown RBP eCLIP8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 TNP2Q05952 138 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 SLC38A11Q08AI6 406 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 KIAA0141Q14154 515 aaPredicted RBP8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 ZNF266Q14584 549 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 TEPPQ6URK8 271 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 TCTE3Q8IZS6 198 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 TMEM217Q8N7C4 229 aa8.53□□□□□ -1.04
SMNDC1-203ENST00000460483 OR5B12Q96R08 314 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms