RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 CLN5O75503 358 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 RNASE2P10153 161 aaKnown RBP8.91□□□□□ -0.98
GPNMB-204ENST00000459927 SPP1P10451 314 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 RPL5P46777 297 aaKnown RBP8.91□□□□□ -0.98
GPNMB-204ENST00000459927 PPP5CP53041 499 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 Q6ZTC4 211 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 TMEM230Q96A57 120 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 RAB40CQ96S21 281 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 MRPL36Q9P0J6 103 aaKnown RBP8.91□□□□□ -0.98
GPNMB-204ENST00000459927 DNAH2Q9P225 4427 aa8.91□□□□□ -0.98
GPNMB-204ENST00000459927 RYR1P21817 5038 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 FAT2Q9NYQ8 4349 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 A0A1B0GVY2 172 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 IFNA17P01571 189 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 IGKV1-5P01602 117 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 P0C879 139 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 C12orf74Q32Q52 190 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 CENPSQ8N2Z9 138 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 STXBP6Q8NFX7 210 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 OR4X1Q8NH49 305 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 DCANP1Q8TF63 244 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 METTL26Q96S19 204 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 RNF126Q9BV68 326 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 FNDC4Q9H6D8 234 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-204ENST00000459927 SCPEP1Q9HB40 452 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 CLEC5AQ9NY25 188 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 U3KQE9 123 aa8.9□□□□□ -0.98
GPNMB-204ENST00000459927 CORTO00230 105 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 ATP6V1G2O95670 118 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 ZNF688P0C7X2 276 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 C4BPBP20851 252 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 P2RY1P47900 373 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 RND3P61587 244 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 LSM3P62310 102 aaKnown RBP8.89□□□□□ -0.99
GPNMB-204ENST00000459927 ACTL10Q5JWF8 245 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 YIPF6Q96EC8 236 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 COMMD3Q9UBI1 195 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 TBC1D24Q9ULP9 559 aa8.89□□□□□ -0.99
GPNMB-204ENST00000459927 TRAV30A0A087WSZ9 112 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 DEFB131BA0A096LNP1 70 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 APOA1P02647 267 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 PGAM2P15259 253 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 PI3P19957 117 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 AP2S1P53680 142 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-204ENST00000459927 TIGITQ495A1 244 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 SNX29P2Q8IUI4 249 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 POM121L12Q8N7R1 296 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 SLC35G3Q8N808 338 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 ZNF486Q96H40 463 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-204ENST00000459927 TP53RKQ96S44 253 aa8.88□□□□□ -0.99
GPNMB-204ENST00000459927 C3orf85A0A1B0GTC6 90 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 M0QYG6 137 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 ATG12O94817 140 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 ELK1P19419 428 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 RCVRNP35243 200 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 PIGPP57054 158 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 DHRS2Q13268 280 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 BSXQ3C1V8 233 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 SP6Q3SY56 376 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 C16orf54Q6UWD8 224 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 Q6ZRM9 215 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 ZNF767PQ75MW2 155 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 LHFPL1Q86WI0 220 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 Q8WTZ3 238 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 NARS2Q96I59 477 aaKnown RBP8.87□□□□□ -0.99
GPNMB-204ENST00000459927 PDCD10Q9BUL8 212 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 MUC4Q99102 2169 aa8.87□□□□□ -0.99
GPNMB-204ENST00000459927 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
GPNMB-204ENST00000459927 HELTA6NFD8 242 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 P0DMU3 169 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 FAM231AP0DMU4 169 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 FAM231CP0DMU5 169 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 NPY1RP25929 384 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 OPRK1P41145 380 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 KCTD21Q4G0X4 260 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 SCRT1Q9BWW7 348 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 ENY2Q9NPA8 101 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 KLK11Q9UBX7 282 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
GPNMB-204ENST00000459927 A0A0G2JRQ6 117 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 PRSS29PA6NIE9 313 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 M0R2N4 97 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 RTL8CO15255 209 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 EIF2B2P49770 351 aaKnown RBP8.85□□□□□ -0.99
GPNMB-204ENST00000459927 AKR1C2P52895 323 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 SPCS3P61009 180 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 YPEL3P61236 119 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-204ENST00000459927 DHODHQ02127 395 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 PSMG4Q5JS54 123 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 PRSS54Q6PEW0 395 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 OR52E5Q8NH55 327 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 TERB2Q8NHR7 220 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 GLMPQ8WWB7 406 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 RRNAD1Q96FB5 475 aaKnown RBP8.85□□□□□ -0.99
GPNMB-204ENST00000459927 SEPSECSQ9HD40 501 aaKnown RBP8.85□□□□□ -0.99
GPNMB-204ENST00000459927 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-204ENST00000459927 XCL2Q9UBD3 114 aa8.85□□□□□ -0.99
GPNMB-204ENST00000459927 PKD1P98161 4303 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms