RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	BSCL2	Q96G97	398 aa	Predicted RBP	7.78	□□□□□ -1.16
MRPL55-223	ENST00000459783	PRR25	Q96S07	402 aa		7.78	□□□□□ -1.16
MRPL55-223	ENST00000459783	ATP6V0B	Q99437	205 aa		7.78	□□□□□ -1.16
MRPL55-223	ENST00000459783	MARVELD1	Q9BSK0	173 aa		7.78	□□□□□ -1.16
MRPL55-223	ENST00000459783	PRSS46	E5RG02	174 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	INMT-MINDY4	F8WBC2	141 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	SYNGR2	O43760	224 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	IGKV1-17	P01599	117 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	OPRK1	P41145	380 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	INSL3	P51460	131 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	IL15RA	Q13261	267 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	IAH1	Q2TAA2	248 aa	Predicted RBP	7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	PRSS54	Q6PEW0	395 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	TMEM190	Q8WZ59	177 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	WDR89	Q96FK6	387 aa	Predicted RBP	7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	GPR61	Q9BZJ8	451 aa		7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	RCL1	Q9Y2P8	373 aa	Known RBP	7.77	□□□□□ -1.17
MRPL55-223	ENST00000459783	DNAH3	Q8TD57	4116 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	PIGBOS1	A0A0B4J2F0	54 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	ZNF320	A2RRD8	509 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783		H3BP45	60 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	CORT	O00230	105 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	WRB	O00258	174 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	CCNK	O75909	580 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	IFNA10	P01566	189 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	IFNA21	P01568	189 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	MBP	P02686	304 aa	Predicted RBP	7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	FOLR2	P14207	255 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	NKX2-1	P43699	371 aa	Predicted RBP	7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	RND2	P52198	227 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	SUB1	P53999	127 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	SPSB3	Q6PJ21	355 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	UXS1	Q8NBZ7	420 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	OR4X1	Q8NH49	305 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	RNASEH2C	Q8TDP1	164 aa	Known RBP	7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	TXN2	Q99757	166 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	ELOVL1	Q9BW60	279 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	HIPK2	Q9H2X6	1198 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	C11orf1	Q9H5F2	150 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	SIGLEC8	Q9NYZ4	499 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	CACFD1	Q9UGQ2	172 aa		7.76	□□□□□ -1.17
MRPL55-223	ENST00000459783	PMS2P5	A8MQ11	134 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	NDUFA4	O00483	81 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	ZNF207	O43670	478 aa	Known RBP	7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	GNG7	O60262	68 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	CLN5	O75503	358 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	SIX6	O95475	246 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	IGLC1	P0CG04	106 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	C8orf88	P0DMB2	117 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	CBLN1	P23435	193 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	DEFA1	P59665	94 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	DEFA3	P59666	94 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	CD69	Q07108	199 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	DEFB114	Q30KQ6	69 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	TIGIT	Q495A1	244 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	FAM106A	Q4KMX7	169 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	SLC16A13	Q7RTY0	426 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	ZFAND3	Q9H8U3	227 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	GSKIP	Q9P0R6	139 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	MLX	Q9UH92	298 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	ZNF256	Q9Y2P7	627 aa	Predicted RBP	7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783		U3KQ87	197 aa		7.75	□□□□□ -1.17
MRPL55-223	ENST00000459783	IGKV1D-37	A0A075B6S9	117 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	C7orf66	A4D0T2	115 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	SNRPGP15	A8MWD9	76 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	SSSCA1	O60232	199 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	SCGB1D2	O95969	90 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	TATDN3	Q17R31	274 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	CD300E	Q496F6	205 aa	Predicted RBP	7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	TOMM20L	Q6UXN7	152 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	TMEM116	Q8NCL8	245 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	NPIPB3	Q92617	1050 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	PEMT	Q9UBM1	199 aa		7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	LSM4	Q9Y4Z0	139 aa	Known RBP	7.74	□□□□□ -1.17
MRPL55-223	ENST00000459783	IGKV1OR2-108	A0A075B7D4	117 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	ZNF785	A8K8V0	405 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	FAM25E	A8MYX2	175 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783		K7EPK0	472 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	NUPL2	O15504	423 aa	Known RBP	7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	PRAF2	O60831	178 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	MED6	O75586	246 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	APOH	P02749	345 aa	Predicted RBP	7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	IFNA4	P05014	189 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	GP9	P14770	177 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	NPBWR1	P48145	328 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	ARL16	Q0P5N6	197 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	GAMT	Q14353	236 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	SPANXN5	Q5MJ07	72 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	BTNL8	Q6UX41	500 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	TMEM61	Q8N0U2	210 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783		Q8N1Y9	231 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	MRAP	Q8TCY5	172 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	ACY3	Q96HD9	319 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	SMIM8	Q96KF7	97 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	C2orf50	Q96LR7	162 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	CIB3	Q96Q77	187 aa	Predicted RBP	7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	C20orf24	Q9BUV8	137 aa		7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	GAR1	Q9NY12	217 aa	Known RBP	7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
MRPL55-223	ENST00000459783	IGHV3OR16-13	A0A075B7E8	117 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms