RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ADMP35318 185 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 CLEC12BQ2HXU8 276 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 IBA57Q5T440 356 aaKnown RBP7.17□□□□□ -1.26
HDAC3-202ENST00000459727 ATP5L2Q7Z4Y8 100 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 BAGE2Q86Y30 109 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 OR5AU1Q8NGC0 362 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 RNASE6Q93091 150 aaKnown RBP7.17□□□□□ -1.26
HDAC3-202ENST00000459727 IGF2BP2-AS1Q96M15 143 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 VKORC1Q9BQB6 163 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 TMEM133Q9H2Q1 129 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF586Q9NXT0 402 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 NAGKQ9UJ70 344 aa7.17□□□□□ -1.26
HDAC3-202ENST00000459727 DMXL2Q8TDJ6 3036 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 IGHV1-69-2A0A0G2JMI3 117 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 KIR2DL5BA0A0G2JN68 375 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 KIR2DL5BA0A0G2JPC4 375 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 PSMB11A5LHX3 300 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 IZUMO1RA6ND01 250 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 GGTLC3B5MD39 225 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 PEX7O00628 323 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 FOXH1O75593 365 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 SCGB1D1O95968 90 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 REG1AP05451 166 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 CRYGCP07315 174 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 CD3EP07766 207 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 RAB4AP20338 218 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 LOXP28300 417 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 RPL27AP46776 148 aaKnown RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 DLX6P56179 175 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 SUMO1P63165 101 aaKnown RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 USF2Q15853 346 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 TMEM183BQ1AE95 376 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 CT83Q5H943 113 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 C1orf194Q5T5A4 169 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 DUX4L9Q6RFH8 374 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 TOMM20LQ6UXN7 152 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 KIR2DL5AQ8N109 375 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 ZCCHC24Q8N2G6 241 aaKnown RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 CCL17Q92583 94 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 FAM167A-AS1Q96KT0 104 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 SLC25A2Q9BXI2 301 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 SAMD10Q9BYL1 202 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF331Q9NQX6 463 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF355PQ9NSJ1 428 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 NAT8BQ9UHF3 227 aa7.16□□□□□ -1.26
HDAC3-202ENST00000459727 RALYQ9UKM9 306 aaKnown RBP7.16□□□□□ -1.26
HDAC3-202ENST00000459727 KIAA2026Q5HYC2 2103 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 IGKV1OR2-108A0A075B7D4 117 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 PGPEP1LA6NFU8 196 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 IGLV2-23P01705 113 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 THBDP07204 575 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 CCL3L1P16619 93 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 CBLN1P23435 193 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 IER3P46695 156 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 PLP1P60201 277 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 UBE2G1P62253 170 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 PRSS8Q16651 343 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 DMRTA1Q5VZB9 504 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 OR8I2Q8N0Y5 310 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF664Q8N3J9 261 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 SIGLECL1Q8N7X8 197 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 C5orf17Q8NAS9 161 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 TMEM116Q8NCL8 245 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF503Q96F45 646 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 ABHD17AQ96GS6 310 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 GRAMD2BQ96HH9 432 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 FMC1Q96HJ9 113 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 CLEC7AQ9BXN2 247 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 TNFRSF19Q9NS68 423 aa7.15□□□□□ -1.26
HDAC3-202ENST00000459727 AURKAIP1Q9NWT8 199 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-202ENST00000459727 MRPL27Q9P0M9 148 aaKnown RBP7.15□□□□□ -1.26
HDAC3-202ENST00000459727 PCNX2A6NKB5 2137 aa7.15□□□□□ -1.27
HDAC3-202ENST00000459727 SHISA9B4DS77 424 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 SLC17A3O00476 420 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 HYPMO75409 117 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 SCGB2A1O75556 95 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 RD3LP0DJH9 198 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 MGST1P10620 155 aaKnown RBP7.14□□□□□ -1.27
HDAC3-202ENST00000459727 HNF1AP20823 631 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 LAMA1P25391 3075 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 S100A7P31151 101 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 WT1-ASQ06250 92 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 FBXL19-AS1Q494R0 122 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 UTF1Q5T230 341 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 CDPF1Q6NVV7 123 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 C19orf35Q6ZS72 473 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF329Q86UD4 541 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 OR10W1Q8NGF6 305 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 OR4B1Q8NGF8 309 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 C8orf46Q8TAG6 207 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 NPIPB3Q92617 1050 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 KCNS1Q96KK3 526 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 C20orf144Q9BQM9 153 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 ATG101Q9BSB4 218 aa7.14□□□□□ -1.27
HDAC3-202ENST00000459727 IGF2RP11717 2491 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 TANC2Q9HCD6 1990 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 IGHV2-26A0A0B4J1V2 119 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 TRBV6-1A0A0K0K1D8 114 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 A0A1W2PPI3 338 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms