RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 TXN2Q99757 166 aa14.08□□□□□ -0.16
USP39-209ENST00000458268 INS-IGF2F8WCM5 200 aa14.07□□□□□ -0.16
USP39-209ENST00000458268 SFT2D2O95562 160 aa14.07□□□□□ -0.16
USP39-209ENST00000458268 IFNA10P01566 189 aa14.07□□□□□ -0.16
USP39-209ENST00000458268 ELLP55199 621 aaPredicted RBP14.07□□□□□ -0.16
USP39-209ENST00000458268 NMSQ5H8A3 153 aa14.07□□□□□ -0.16
USP39-209ENST00000458268 DEFB125Q8N687 156 aa14.07□□□□□ -0.16
USP39-209ENST00000458268 ATP6V0BQ99437 205 aa14.07□□□□□ -0.16
USP39-209ENST00000458268 RBKSQ9H477 322 aa14.07□□□□□ -0.16
USP39-209ENST00000458268 FNDC4Q9H6D8 234 aaPredicted RBP14.07□□□□□ -0.16
USP39-209ENST00000458268 PAIP2BQ9ULR5 123 aaKnown RBP14.07□□□□□ -0.16
USP39-209ENST00000458268 IGKV3-7A0A075B6H7 116 aa14.06□□□□□ -0.16
USP39-209ENST00000458268 NPY1RP25929 384 aa14.06□□□□□ -0.16
USP39-209ENST00000458268 TNFRSF9Q07011 255 aa14.06□□□□□ -0.16
USP39-209ENST00000458268 SLC16A13Q7RTY0 426 aa14.06□□□□□ -0.16
USP39-209ENST00000458268 DTD1Q8TEA8 209 aa14.06□□□□□ -0.16
USP39-209ENST00000458268 ZMAT4Q9H898 229 aa14.06□□□□□ -0.16
USP39-209ENST00000458268 MRPL36Q9P0J6 103 aaKnown RBP14.06□□□□□ -0.16
USP39-209ENST00000458268 COL7A1Q02388 2944 aa14.06□□□□□ -0.16
USP39-209ENST00000458268 RPS10-NUDT3A0A1W2PQS6 291 aa14.05□□□□□ -0.16
USP39-209ENST00000458268 OR11H12B2RN74 326 aa14.05□□□□□ -0.16
USP39-209ENST00000458268 NDUFB6O95139 128 aa14.05□□□□□ -0.16
USP39-209ENST00000458268 IAPPP10997 89 aa14.05□□□□□ -0.16
USP39-209ENST00000458268 AARDQ4LEZ3 155 aa14.05□□□□□ -0.16
USP39-209ENST00000458268 SRD5A3Q9H8P0 318 aa14.05□□□□□ -0.16
USP39-209ENST00000458268 PUS1Q9Y606 427 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP39-209ENST00000458268 IGHV3-66A0A0C4DH42 116 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 A0A1B0GU03 582 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 SCGB2A1O75556 95 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 TMEM50AO95807 157 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 C8orf88P0DMB2 117 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 ANXA7P20073 488 aaKnown RBP14.04□□□□□ -0.16
USP39-209ENST00000458268 FCGR2BP31994 310 aaPredicted RBP14.04□□□□□ -0.16
USP39-209ENST00000458268 TFPI2P48307 235 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 RND2P52198 227 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 C4orf46Q504U0 113 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 C2orf83Q53S99 150 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 LAMTOR1Q6IAA8 161 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 TMEM116Q8NCL8 245 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 ACY3Q96HD9 319 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 RCHY1Q96PM5 261 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 HSPB7Q9UBY9 170 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 UBQLN2Q9UHD9 624 aa14.04□□□□□ -0.16
USP39-209ENST00000458268 PIGBOS1A0A0B4J2F0 54 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 IGHV7-4-1A0A0J9YVY3 117 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 C15orf62A8K5M9 175 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 CNPY1Q3B7I2 92 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 BSXQ3C1V8 233 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 TIGITQ495A1 244 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 TOMM20LQ6UXN7 152 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 ZNF600Q6ZNG1 722 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 C7orf50Q9BRJ6 194 aaKnown RBP14.03□□□□□ -0.16
USP39-209ENST00000458268 GINS3Q9BRX5 216 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 RHPN1-AS1Q9BWJ2 59 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 MAGT1Q9H0U3 335 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 C19orf73Q9NVV2 129 aa14.03□□□□□ -0.16
USP39-209ENST00000458268 TRAV14DV4A0A0A6YYC5 116 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 DUXBA0A1W2PPF3 345 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 C9orf170A2RU37 121 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 K7EMT4 169 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 CLN5O75503 358 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 IFNA4P05014 189 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 BTCP35070 178 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 GGNBP1Q5YKI7 109 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 CACFD1Q9UGQ2 172 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 SMPXQ9UHP9 88 aa14.02□□□□□ -0.17
USP39-209ENST00000458268 TRAV25A0A0B4J276 109 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 LYRM1O43325 122 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 ADAP1O75689 374 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 OR4E1P0C645 316 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 HAGHQ16775 308 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 NOXA1Q86UR1 476 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 OR4X1Q8NH49 305 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 COQ8AQ8NI60 647 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 RNASEH2CQ8TDP1 164 aaKnown RBP14.01□□□□□ -0.17
USP39-209ENST00000458268 TMEM170AQ8WVE7 144 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 ZNF414Q96IQ9 312 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 WWC2-AS2Q96NR7 200 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 RNF2Q99496 336 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 TMED3Q9Y3Q3 217 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 DNAH9Q9NYC9 4486 aa14.01□□□□□ -0.17
USP39-209ENST00000458268 CHEK1O14757 476 aa14□□□□□ -0.17
USP39-209ENST00000458268 UBE2MP61081 183 aaKnown RBP14□□□□□ -0.17
USP39-209ENST00000458268 RPL11P62913 178 aaKnown RBP14□□□□□ -0.17
USP39-209ENST00000458268 PVRIGQ6DKI7 326 aa14□□□□□ -0.17
USP39-209ENST00000458268 ETFRF1Q6IPR1 90 aa14□□□□□ -0.17
USP39-209ENST00000458268 LYG2Q86SG7 212 aa14□□□□□ -0.17
USP39-209ENST00000458268 GBGT1Q8N5D6 347 aa14□□□□□ -0.17
USP39-209ENST00000458268 LRTM2Q8N967 370 aa14□□□□□ -0.17
USP39-209ENST00000458268 RETNQ9HD89 108 aa14□□□□□ -0.17
USP39-209ENST00000458268 TRAV6A0A075B6T7 132 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 WRBO00258 174 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 PLA2G10O15496 165 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 SLC25A4P12235 298 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 OR10J1P30954 320 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 DHRS2Q13268 280 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 PRSS54Q6PEW0 395 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 WFDC3Q8IUB2 231 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 ST8SIA2Q92186 375 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 NPIPB3Q92617 1050 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms