RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 NAT1P18440 290 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 IFITM3Q01628 133 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 SSBP1Q04837 148 aaKnown RBP8.61□□□□□ -1.03
LMCD1-206ENST00000456506 IL18Q14116 193 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 LEMD1Q68G75 181 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 PVRIGQ6DKI7 326 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 TOMM20LQ6UXN7 152 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 TCF24Q7RTU0 167 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 TRPT1Q86TN4 253 aaKnown RBP8.61□□□□□ -1.03
LMCD1-206ENST00000456506 SMIM4Q8WVI0 70 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 PRNDQ9UKY0 176 aa8.61□□□□□ -1.03
LMCD1-206ENST00000456506 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
LMCD1-206ENST00000456506 IGHV4-28A0A0C4DH34 117 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 GABARAPH6UMI1 98 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 DFFBO76075 338 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 MT-CO2P00403 227 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 C4BPBP20851 252 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 CBX5P45973 191 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 RFX2P48378 723 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 MFAP4P55083 255 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 TAS2R20P59543 309 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 DEFB131AP59861 70 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 HERV-K104P61576 105 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 ERVK-16P61578 105 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 BAK1Q16611 211 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 TMEM69Q5SWH9 247 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 Q6ZTC4 211 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 LYSMD2Q8IV50 215 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 DEDD2Q8WXF8 326 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 SEC22AQ96IW7 307 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 TMEM56Q96MV1 263 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 ZNF2Q9BSG1 426 aaPredicted RBP8.6□□□□□ -1.03
LMCD1-206ENST00000456506 SCPEP1Q9HB40 452 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 EHFQ9NZC4 300 aa8.6□□□□□ -1.03
LMCD1-206ENST00000456506 IGHV4-4A0A075B6R2 117 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 A0A1B0GU03 582 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 RTL8CO15255 209 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 SNAPC5O75971 98 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 YIF1AO95070 293 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 IL7P13232 177 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 HLA-DMBP28068 263 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 PRCDQ00LT1 54 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 PYDC2Q56P42 97 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 GPX8Q8TED1 209 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 TRIM63Q969Q1 353 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 MISP3Q96FF7 219 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 FAM212BQ9NTI7 297 aaPredicted RBP8.59□□□□□ -1.03
LMCD1-206ENST00000456506 FKBP11Q9NYL4 201 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 MTFP1Q9UDX5 166 aa8.59□□□□□ -1.03
LMCD1-206ENST00000456506 K7EQG2 157 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 GPR31O00270 319 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 CD5P06127 495 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 MIFP14174 115 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 PRSS3P35030 304 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 SCRT1Q9BWW7 348 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 MRPL36Q9P0J6 103 aaKnown RBP8.58□□□□□ -1.04
LMCD1-206ENST00000456506 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
LMCD1-206ENST00000456506 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 ST8SIA3O43173 380 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 PMP2P02689 132 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 AMBPP02760 352 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 P0C879 139 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 ASAH1Q13510 395 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 OR52I2Q8NH67 350 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 DCANP1Q8TF63 244 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 C7orf50Q9BRJ6 194 aaKnown RBP8.57□□□□□ -1.04
LMCD1-206ENST00000456506 GINS3Q9BRX5 216 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
LMCD1-206ENST00000456506 PUS1Q9Y606 427 aaKnown RBP eCLIP8.57□□□□□ -1.04
LMCD1-206ENST00000456506 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 ANKRD20A5PA0PJZ0 165 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 INS-IGF2F8WCM5 200 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 PLA2G10O15496 165 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 GNG7O60262 68 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 TMEM50AO95807 157 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 HSPE1P61604 102 aaKnown RBP8.56□□□□□ -1.04
LMCD1-206ENST00000456506 C12orf74Q32Q52 190 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 PHLDA2Q53GA4 152 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 ZNF600Q6ZNG1 722 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 SNX29P2Q8IUI4 249 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 DUSP18Q8NEJ0 188 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 PINX1Q96BK5 328 aaKnown RBP8.56□□□□□ -1.04
LMCD1-206ENST00000456506 GRAMD2BQ96HH9 432 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 RNF126Q9BV68 326 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 TBC1D24Q9ULP9 559 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
LMCD1-206ENST00000456506 SPP1P10451 314 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 CRYBB3P26998 211 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 TAS2R46P59540 309 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 DEFA1P59665 94 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 DEFA3P59666 94 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 KLF9Q13886 244 aaPredicted RBP8.55□□□□□ -1.04
LMCD1-206ENST00000456506 OXA1LQ15070 435 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 IZUMO4Q1ZYL8 232 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 TMEM41BQ5BJD5 291 aa8.55□□□□□ -1.04
LMCD1-206ENST00000456506 TRIQKQ629K1 86 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms